PSME_00045265-RA


Description : (at3g04610 : 116.0) flowering locus KH domain (FLK); FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: positive regulation of flower development; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT4G26000.1); Has 8156 Blast hits to 5360 proteins in 381 species: Archae - 0; Bacteria - 269; Metazoa - 3587; Fungi - 776; Plants - 1209; Viruses - 216; Other Eukaryotes - 2099 (source: NCBI BLink). & (reliability: 216.0) & (original description: no original description)


Gene families : OG_42_0000691 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000691_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00045265-RA
Cluster HCCA clusters: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
409630 No alias RNA-binding KH domain-containing protein 0.03 Orthogroups_2024-Update
Brara.A01595.1 No alias regulatory protein *(PEP) of autonomous floral-promotion pathway 0.03 Orthogroups_2024-Update
Kfl00180_0080 kfl00180_0080_v1.1 (at3g04610 : 157.0) flowering locus KH domain (FLK);... 0.02 Orthogroups_2024-Update
MA_10433906g0010 No alias (at3g04610 : 263.0) flowering locus KH domain (FLK);... 0.03 Orthogroups_2024-Update
PSME_00018482-RA No alias (at4g26000 : 103.0) Encodes a novel Arabidopsis gene... 0.04 Orthogroups_2024-Update
PSME_00040942-RA No alias (at4g26000 : 130.0) Encodes a novel Arabidopsis gene... 0.04 Orthogroups_2024-Update
PSME_00051907-RA No alias (at3g04610 : 125.0) flowering locus KH domain (FLK);... 0.04 Orthogroups_2024-Update
PSME_00052310-RA No alias (at3g04610 : 124.0) flowering locus KH domain (FLK);... 0.02 Orthogroups_2024-Update
PSME_00055373-RA No alias (at3g04610 : 113.0) flowering locus KH domain (FLK);... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP Predicted GO
MF GO:0004185 serine-type carboxypeptidase activity IEP Predicted GO
MF GO:0004650 polygalacturonase activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
MF GO:0008146 sulfotransferase activity IEP Predicted GO
BP GO:0009690 cytokinin metabolic process IEP Predicted GO
BP GO:0010817 regulation of hormone levels IEP Predicted GO
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Predicted GO
MF GO:0019139 cytokinin dehydrogenase activity IEP Predicted GO
BP GO:0034754 cellular hormone metabolic process IEP Predicted GO
BP GO:0042445 hormone metabolic process IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!