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  5. PSME_00045314-RA

PSME_00045314-RA


Description : no hits & (original description: no original description)


Gene families : OG_42_0000540 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000540_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00045314-RA
Cluster HCCA clusters: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
7704 No alias CHASE domain containing histidine kinase protein 0.03 Orthogroups_2024-Update
PSME_00026223-RA No alias (at5g26594 : 92.8) Encodes an atypical subtype of the... 0.04 Orthogroups_2024-Update
Potri.001G050800 No alias response regulator 24 0.03 Orthogroups_2024-Update
evm.model.tig00000139.17 No alias no hits & (original description: no original description) 0.01 Orthogroups_2024-Update
evm.model.tig00020603.78 No alias (at2g01830 : 116.0) Histidine kinase: cytokinin-binding... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0005244 voltage-gated ion channel activity IEP Predicted GO
MF GO:0005247 voltage-gated chloride channel activity IEP Predicted GO
MF GO:0005253 anion channel activity IEP Predicted GO
MF GO:0005254 chloride channel activity IEP Predicted GO
BP GO:0006298 mismatch repair IEP Predicted GO
BP GO:0006821 chloride transport IEP Predicted GO
MF GO:0008308 voltage-gated anion channel activity IEP Predicted GO
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Predicted GO
MF GO:0015108 chloride transmembrane transporter activity IEP Predicted GO
BP GO:0015698 inorganic anion transport IEP Predicted GO
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
MF GO:0022832 voltage-gated channel activity IEP Predicted GO
MF GO:0030983 mismatched DNA binding IEP Predicted GO
MF GO:0034062 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0097747 RNA polymerase activity IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!