1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00045343-RA

PSME_00045343-RA


Description : (at2g22070 : 589.0) pentatricopeptide (PPR) repeat-containing protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G25360.1); Has 47939 Blast hits to 14346 proteins in 287 species: Archae - 0; Bacteria - 20; Metazoa - 98; Fungi - 122; Plants - 46979; Viruses - 0; Other Eukaryotes - 720 (source: NCBI BLink). & (q76c99|rf1_orysa : 120.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1132.0) & (original description: no original description)


Gene families : OG_42_0022413 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00045343-RA
Cluster HCCA clusters: Cluster_230


Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 520 567
IPR002885 Pentatricopeptide_repeat 156 203
IPR032867 DYW_dom 695 818
IPR002885 Pentatricopeptide_repeat 661 690
IPR002885 Pentatricopeptide_repeat 391 421
IPR002885 Pentatricopeptide_repeat 596 619
IPR002885 Pentatricopeptide_repeat 259 288
IPR002885 Pentatricopeptide_repeat 290 320
IPR002885 Pentatricopeptide_repeat 363 385
No external refs found!