1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00045405-RA

PSME_00045405-RA


Description : (at5g52060 : 124.0) A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development.; BCL-2-associated athanogene 1 (BAG1); INVOLVED IN: regulation of apoptosis, apoptosis; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Apoptosis regulator, Bcl-2 protein, BAG (InterPro:IPR003103), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: BCL-2-associated athanogene 3 (TAIR:AT5G07220.1); Has 385 Blast hits to 385 proteins in 61 species: Archae - 0; Bacteria - 4; Metazoa - 126; Fungi - 8; Plants - 222; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (reliability: 248.0) & (original description: no original description)


Gene families : OG_42_0000402 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000402_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00045405-RA
Cluster HCCA clusters: Cluster_77

Target Alias Description ECC score Gene Family Method Actions
PSME_00023992-RA No alias (at5g52060 : 84.3) A member of Arabidopsis BAG... 0.08 Orthogroups_2024-Update
PSME_00028806-RA No alias (at5g52060 : 226.0) A member of Arabidopsis BAG... 0.08 Orthogroups_2024-Update
PSME_00029289-RA No alias (at5g52060 : 187.0) A member of Arabidopsis BAG... 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0051087 chaperone binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
CC GO:0005741 mitochondrial outer membrane IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
CC GO:0019867 outer membrane IEP Predicted GO
CC GO:0031090 organelle membrane IEP Predicted GO
CC GO:0031966 mitochondrial membrane IEP Predicted GO
CC GO:0031968 organelle outer membrane IEP Predicted GO
CC GO:0044429 mitochondrial part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0098588 bounding membrane of organelle IEP Predicted GO
CC GO:0098805 whole membrane IEP Predicted GO
InterPro domains Description Start Stop
IPR003103 BAG_domain 48 119
No external refs found!