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  5. PSME_00045480-RA

PSME_00045480-RA


Description : (at2g39770 : 499.0) Encodes a GDP-mannose pyrophosphorylase/ mannose-1-pyrophosphatase. This enzyme provides GDP-mannose, which is used for cell wall carbohydrate biosynthesis and protein glycosylation as well as for ascorbate (vitamin C) biosynthesis. Mutations in this gene confer hypersensitivity to NH4+.; CYTOKINESIS DEFECTIVE 1 (CYT1); CONTAINS InterPro DOMAIN/s: Trimeric LpxA-like (InterPro:IPR011004), Bacterial transferase hexapeptide repeat (InterPro:IPR001451), Nucleotidyl transferase (InterPro:IPR005835); BEST Arabidopsis thaliana protein match is: Glucose-1-phosphate adenylyltransferase family protein (TAIR:AT3G55590.1). & (reliability: 998.0) & (original description: no original description)


Gene families : OG_42_0001922 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001922_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00045480-RA
Cluster HCCA clusters: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
Bradi1g66930 No alias Glucose-1-phosphate adenylyltransferase family protein 0.03 Orthogroups_2024-Update
Brara.C02663.1 No alias GDP-D-mannose pyrophosphorylase *(VTC1) & EC_2.7... 0.03 Orthogroups_2024-Update
Brara.K00541.1 No alias GDP-D-mannose pyrophosphorylase *(VTC1) & EC_2.7... 0.03 Orthogroups_2024-Update
GRMZM2G149265 No alias Glucose-1-phosphate adenylyltransferase family protein 0.04 Orthogroups_2024-Update
MA_945138g0010 No alias (at2g39770 : 506.0) Encodes a GDP-mannose... 0.03 Orthogroups_2024-Update
Potri.008G060100 No alias Glucose-1-phosphate adenylyltransferase family protein 0.04 Orthogroups_2024-Update
Seita.9G460100.1 No alias GDP-D-mannose pyrophosphorylase *(VTC1) & GDP-D-mannose... 0.02 Orthogroups_2024-Update
Solyc09g011220 No alias Mannose-1-phosphate guanyltransferase, putative (AHRD... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0009058 biosynthetic process IEA InterProScan predictions
MF GO:0016779 nucleotidyltransferase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0004055 argininosuccinate synthase activity IEP Predicted GO
MF GO:0004356 glutamate-ammonia ligase activity IEP Predicted GO
MF GO:0005092 GDP-dissociation inhibitor activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
BP GO:0006082 organic acid metabolic process IEP Predicted GO
BP GO:0006520 cellular amino acid metabolic process IEP Predicted GO
BP GO:0006525 arginine metabolic process IEP Predicted GO
BP GO:0006526 arginine biosynthetic process IEP Predicted GO
BP GO:0006541 glutamine metabolic process IEP Predicted GO
BP GO:0006542 glutamine biosynthetic process IEP Predicted GO
BP GO:0007264 small GTPase mediated signal transduction IEP Predicted GO
BP GO:0008652 cellular amino acid biosynthetic process IEP Predicted GO
BP GO:0009064 glutamine family amino acid metabolic process IEP Predicted GO
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predicted GO
MF GO:0016211 ammonia ligase activity IEP Predicted GO
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Predicted GO
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Predicted GO
BP GO:0019752 carboxylic acid metabolic process IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
BP GO:1901605 alpha-amino acid metabolic process IEP Predicted GO
BP GO:1901607 alpha-amino acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR005835 NTP_transferase_dom 42 210
IPR001451 Hexapep 280 314
IPR001451 Hexapep 234 259
No external refs found!