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  5. PSME_00045574-RA

PSME_00045574-RA


Description : (q41144|stc_ricco : 650.0) Sugar carrier protein C - Ricinus communis (Castor bean) & (at1g11260 : 634.0) Encodes a H+/hexose cotransporter.; sugar transporter 1 (STP1); FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: nucleus, plasma membrane, vacuole, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: sugar transporter protein 12 (TAIR:AT4G21480.1); Has 29569 Blast hits to 28978 proteins in 2050 species: Archae - 503; Bacteria - 13950; Metazoa - 4366; Fungi - 6940; Plants - 2466; Viruses - 2; Other Eukaryotes - 1342 (source: NCBI BLink). & (reliability: 1268.0) & (original description: no original description)


Gene families : OG_42_0000081 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000081_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00045574-RA
Cluster HCCA clusters: Cluster_164

Target Alias Description ECC score Gene Family Method Actions
437470 No alias Major facilitator superfamily protein 0.03 Orthogroups_2024-Update
Bradi1g59420 No alias sugar transporter 1 0.03 Orthogroups_2024-Update
Bradi4g16060 No alias Major facilitator superfamily protein 0.03 Orthogroups_2024-Update
Brara.F02793.1 No alias monosaccharide transporter *(STP) 0.03 Orthogroups_2024-Update
Glyma.10G249400 No alias Major facilitator superfamily protein 0.03 Orthogroups_2024-Update
Potri.005G090700 No alias Major facilitator superfamily protein 0.03 Orthogroups_2024-Update
Seita.1G079800.1 No alias monosaccharide transporter *(STP) 0.03 Orthogroups_2024-Update
Seita.2G176800.1 No alias monosaccharide transporter *(STP) 0.02 Orthogroups_2024-Update
Seita.4G029600.1 No alias monosaccharide transporter *(STP) 0.03 Orthogroups_2024-Update
Seita.9G488700.1 No alias monosaccharide transporter *(STP) 0.02 Orthogroups_2024-Update
Sobic.006G101900.1 No alias monosaccharide transporter *(STP) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA InterProScan predictions
MF GO:0022857 transmembrane transporter activity IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0006606 protein import into nucleus IEP Predicted GO
BP GO:0006886 intracellular protein transport IEP Predicted GO
BP GO:0006913 nucleocytoplasmic transport IEP Predicted GO
BP GO:0017038 protein import IEP Predicted GO
BP GO:0033365 protein localization to organelle IEP Predicted GO
BP GO:0034504 protein localization to nucleus IEP Predicted GO
BP GO:0034613 cellular protein localization IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0051169 nuclear transport IEP Predicted GO
BP GO:0051170 import into nucleus IEP Predicted GO
MF GO:0061608 nuclear import signal receptor activity IEP Predicted GO
BP GO:0070727 cellular macromolecule localization IEP Predicted GO
BP GO:0072594 establishment of protein localization to organelle IEP Predicted GO
MF GO:0140104 molecular carrier activity IEP Predicted GO
MF GO:0140142 nucleocytoplasmic carrier activity IEP Predicted GO
InterPro domains Description Start Stop
IPR005828 MFS_sugar_transport-like 41 500
No external refs found!