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PSME_00045808-RA


Description : (at4g00820 : 159.0) IQ-domain 17 (iqd17); CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: IQ-domain 18 (TAIR:AT1G01110.2); Has 1332 Blast hits to 1131 proteins in 120 species: Archae - 0; Bacteria - 14; Metazoa - 172; Fungi - 58; Plants - 857; Viruses - 43; Other Eukaryotes - 188 (source: NCBI BLink). & (reliability: 318.0) & (original description: no original description)


Gene families : OG_42_0000276 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000276_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00045808-RA
Cluster HCCA clusters: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
423607 No alias IQ-domain 2 0.04 Orthogroups_2024-Update
A4A49_38184 No alias protein iq-domain 1 0.05 Orthogroups_2024-Update
Bradi2g18220 No alias IQ-domain 8 0.05 Orthogroups_2024-Update
Brara.A03516.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os03g44610 No alias IQ calmodulin-binding motif domain containing protein, expressed 0.03 Orthogroups_2024-Update
PSME_00041158-RA No alias (at3g22190 : 225.0) IQ-domain 5 (IQD5); FUNCTIONS IN:... 0.03 Orthogroups_2024-Update
Potri.003G042700 No alias IQ-domain 8 0.03 Orthogroups_2024-Update
Potri.006G131100 No alias IQ-domain 2 0.02 Orthogroups_2024-Update
Pp1s272_37V6 No alias hypothetical protein similar to Arabidopsis thaliana... 0.03 Orthogroups_2024-Update
Pp1s60_111V6 No alias T25B15.60; calmodulin-binding family protein... 0.03 Orthogroups_2024-Update
Seita.5G290100.1 No alias Unknown function 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
MF GO:0004857 enzyme inhibitor activity IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
InterPro domains Description Start Stop
IPR025064 DUF4005 406 463
IPR000048 IQ_motif_EF-hand-BS 122 142
IPR000048 IQ_motif_EF-hand-BS 145 162
No external refs found!