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  5. PSME_00045904-RA

PSME_00045904-RA


Description : (at4g34890 : 676.0) Encodes a xanthine dehydrogenase, involved in purine catabolism. Ubiquitously expressed, but the transcript level is altered during aging, senescence, salt and cold stress, ABA treatment, and dark treatment. RNAi lines that suppress both XDH1 and XDH2 produce small plants with reduced fertility and accelerated leaf senescence. Role in drought tolerance.; xanthine dehydrogenase 1 (XDH1); CONTAINS InterPro DOMAIN/s: Aldehyde oxidase/xanthine dehydrogenase (InterPro:IPR016208), Ferredoxin (InterPro:IPR001041), Molybdopterin dehydrogenase, FAD-binding (InterPro:IPR002346), [2Fe-2S]-binding (InterPro:IPR002888), FAD-binding, type 2, subdomain 1 (InterPro:IPR016167), FAD-binding, type 2 (InterPro:IPR016166), CO dehydrogenase flavoprotein, C-terminal (InterPro:IPR005107), 2Fe-2S ferredoxin, iron-sulphur binding site (InterPro:IPR006058), CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 (InterPro:IPR016169), Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead (InterPro:IPR000674), Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding (InterPro:IPR008274); BEST Arabidopsis thaliana protein match is: xanthine dehydrogenase 2 (TAIR:AT4G34900.1); Has 21952 Blast hits to 20911 proteins in 1336 species: Archae - 451; Bacteria - 13165; Metazoa - 1072; Fungi - 101; Plants - 265; Viruses - 0; Other Eukaryotes - 6898 (source: NCBI BLink). & (q69r21|aldo4_orysa : 146.0) Probable aldehyde oxidase 4 (EC 1.2.3.1) (AO-4) - Oryza sativa (Rice) & (reliability: 1352.0) & (original description: no original description)


Gene families : OG_42_0000622 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000622_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00045904-RA
Cluster HCCA clusters: Cluster_249

Target Alias Description ECC score Gene Family Method Actions
268099 No alias aldehyde oxidase 2 0.04 Orthogroups_2024-Update
443347 No alias aldehyde oxidase 2 0.03 Orthogroups_2024-Update
A4A49_08046 No alias xanthine dehydrogenase 1 0.02 Orthogroups_2024-Update
Bradi1g15800 No alias xanthine dehydrogenase 1 0.04 Orthogroups_2024-Update
Kfl00052_0070 kfl00052_0070_v1.... (at4g34890 : 642.0) Encodes a xanthine dehydrogenase,... 0.02 Orthogroups_2024-Update
Kfl00083_0390 kfl00083_0390_v1.1 (at4g34890 : 1550.0) Encodes a xanthine dehydrogenase,... 0.02 Orthogroups_2024-Update
Solyc11g071620 No alias aldehyde oxidase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0009055 electron transfer activity IEA InterProScan predictions
MF GO:0016491 oxidoreductase activity IEA InterProScan predictions
MF GO:0046872 metal ion binding IEA InterProScan predictions
MF GO:0051536 iron-sulfur cluster binding IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0002161 aminoacyl-tRNA editing activity IEP Predicted GO
MF GO:0005086 ARF guanyl-nucleotide exchange factor activity IEP Predicted GO
BP GO:0006479 protein methylation IEP Predicted GO
MF GO:0008170 N-methyltransferase activity IEP Predicted GO
BP GO:0008213 protein alkylation IEP Predicted GO
MF GO:0008276 protein methyltransferase activity IEP Predicted GO
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Predicted GO
BP GO:0009966 regulation of signal transduction IEP Predicted GO
BP GO:0010646 regulation of cell communication IEP Predicted GO
MF GO:0016278 lysine N-methyltransferase activity IEP Predicted GO
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Predicted GO
BP GO:0016569 covalent chromatin modification IEP Predicted GO
BP GO:0016570 histone modification IEP Predicted GO
BP GO:0016571 histone methylation IEP Predicted GO
BP GO:0018022 peptidyl-lysine methylation IEP Predicted GO
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Predicted GO
BP GO:0018205 peptidyl-lysine modification IEP Predicted GO
BP GO:0023051 regulation of signaling IEP Predicted GO
CC GO:0030117 membrane coat IEP Predicted GO
BP GO:0032012 regulation of ARF protein signal transduction IEP Predicted GO
BP GO:0032259 methylation IEP Predicted GO
BP GO:0034968 histone lysine methylation IEP Predicted GO
MF GO:0042054 histone methyltransferase activity IEP Predicted GO
BP GO:0043414 macromolecule methylation IEP Predicted GO
BP GO:0046578 regulation of Ras protein signal transduction IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
BP GO:0048583 regulation of response to stimulus IEP Predicted GO
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Predicted GO
BP GO:1902531 regulation of intracellular signal transduction IEP Predicted GO
InterPro domains Description Start Stop
IPR001041 2Fe-2S_ferredoxin-type 24 90
IPR002888 2Fe-2S-bd 101 175
IPR002346 Mopterin_DH_FAD-bd 269 446
IPR005107 CO_DH_flav_C 455 559
No external refs found!