1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00045917-RA

PSME_00045917-RA


Description : (at1g75290 : 218.0) encodes a protein whose sequence is similar to an isoflavone reductase; NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on NADH or NADPH; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: sepal, male gametophyte, flower, carpel; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: NmrA-like negative transcriptional regulator family protein (TAIR:AT1G75280.1); Has 2800 Blast hits to 2796 proteins in 694 species: Archae - 20; Bacteria - 1285; Metazoa - 16; Fungi - 637; Plants - 615; Viruses - 7; Other Eukaryotes - 220 (source: NCBI BLink). & (p52579|ifrh_tobac : 208.0) Isoflavone reductase homolog A622 (EC 1.3.1.-) - Nicotiana tabacum (Common tobacco) & (reliability: 436.0) & (original description: no original description)


Gene families : OG_42_0000162 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000162_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00045917-RA
Cluster HCCA clusters: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
AC226235.2_FG001 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.02 Orthogroups_2024-Update
Bradi4g39269 No alias pinoresinol reductase 1 0.02 Orthogroups_2024-Update
Brara.B02201.1 No alias EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.02 Orthogroups_2024-Update
Glyma.11G070600 No alias NmrA-like negative transcriptional regulator family protein 0.03 Orthogroups_2024-Update
MA_10427035g0010 No alias (p52579|ifrh_tobac : 317.0) Isoflavone reductase homolog... 0.03 Orthogroups_2024-Update
MA_222809g0010 No alias (at1g32100 : 296.0) Encodes a pinoresinol reductase... 0.04 Orthogroups_2024-Update
PSME_00001513-RA No alias (at4g13660 : 336.0) Encodes a pinoresinol reductase... 0.04 Orthogroups_2024-Update
PSME_00009043-RA No alias (p52578|ifrh_soltu : 272.0) Isoflavone reductase homolog... 0.03 Orthogroups_2024-Update
PSME_00032967-RA No alias (at1g75280 : 258.0) isoflavone reductase, putative,... 0.04 Orthogroups_2024-Update
PSME_00037172-RA No alias (p52579|ifrh_tobac : 248.0) Isoflavone reductase homolog... 0.02 Orthogroups_2024-Update
PSME_00044715-RA No alias (at4g39230 : 367.0) encodes a protein whose sequence is... 0.06 Orthogroups_2024-Update
PSME_00045113-RA No alias (at4g39230 : 265.0) encodes a protein whose sequence is... 0.04 Orthogroups_2024-Update
Potri.005G228700 No alias NmrA-like negative transcriptional regulator family protein 0.02 Orthogroups_2024-Update
Seita.5G071100.1 No alias EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.08 Orthogroups_2024-Update
Sobic.003G241300.1 No alias EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR008030 NmrA-like 6 153
No external refs found!