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  5. PSME_00046017-RA

PSME_00046017-RA


Description : (at2g23360 : 332.0) Plant protein of unknown function (DUF869); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF869, plant (InterPro:IPR008587); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF869) (TAIR:AT1G19835.2); Has 38218 Blast hits to 24021 proteins in 1620 species: Archae - 547; Bacteria - 4231; Metazoa - 19834; Fungi - 3463; Plants - 2306; Viruses - 121; Other Eukaryotes - 7716 (source: NCBI BLink). & (reliability: 664.0) & (original description: no original description)


Gene families : OG_42_0001150 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001150_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00046017-RA
Cluster HCCA clusters: Cluster_109

Target Alias Description ECC score Gene Family Method Actions
A4A49_07733 No alias filament-like plant protein 6 0.03 Orthogroups_2024-Update
Glyma.07G215000 No alias Plant protein of unknown function (DUF869) 0.03 Orthogroups_2024-Update
Pp1s166_50V6 No alias F6F9.12; expressed protein [Arabidopsis thaliana] 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0004525 ribonuclease III activity IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0006808 regulation of nitrogen utilization IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
BP GO:0007275 multicellular organism development IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Predicted GO
BP GO:0032501 multicellular organismal process IEP Predicted GO
BP GO:0032502 developmental process IEP Predicted GO
BP GO:0048856 anatomical structure development IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR008587 FPP_plant 35 1005
No external refs found!