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  5. PSME_00046059-RA

PSME_00046059-RA


Description : no hits & (original description: no original description)


Gene families : OG_42_0000349 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000349_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00046059-RA
Cluster HCCA clusters: Cluster_212

Target Alias Description ECC score Gene Family Method Actions
A4A49_10090 No alias protein tify 10a 0.07 Orthogroups_2024-Update
A4A49_42021 No alias protein tify 10a 0.06 Orthogroups_2024-Update
AC197764.4_FG003 No alias TIFY domain/Divergent CCT motif family protein 0.04 Orthogroups_2024-Update
At1g17380 No alias Protein TIFY 11A [Source:UniProtKB/Swiss-Prot;Acc:Q9LDU5] 0.04 Orthogroups_2024-Update
At1g72450 No alias TIFY11B [Source:UniProtKB/TrEMBL;Acc:A0A178W2J3] 0.02 Orthogroups_2024-Update
Bradi2g05850 No alias TIFY domain/Divergent CCT motif family protein 0.03 Orthogroups_2024-Update
Bradi3g23220 No alias jasmonate-zim-domain protein 1 0.05 Orthogroups_2024-Update
Bradi4g31240 No alias jasmonate-zim-domain protein 1 0.02 Orthogroups_2024-Update
Brara.F01223.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.F01350.1 No alias component *(JAZ) of jasmonic acid receptor complex &... 0.03 Orthogroups_2024-Update
Brara.G03130.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.H02382.1 No alias component *(JAZ) of jasmonic acid receptor complex &... 0.04 Orthogroups_2024-Update
Brara.I04752.1 No alias TIFY-type transcription factor 0.01 Orthogroups_2024-Update
Brara.K00975.1 No alias component *(JAZ) of jasmonic acid receptor complex &... 0.03 Orthogroups_2024-Update
GRMZM2G089736 No alias TIFY domain/Divergent CCT motif family protein 0.02 Orthogroups_2024-Update
GRMZM2G145458 No alias jasmonate-zim-domain protein 11 0.03 Orthogroups_2024-Update
GRMZM5G838098 No alias jasmonate-zim-domain protein 1 0.05 Orthogroups_2024-Update
Glyma.01G204400 No alias TIFY domain/Divergent CCT motif family protein 0.03 Orthogroups_2024-Update
Glyma.04G013800 No alias jasmonate-zim-domain protein 1 0.02 Orthogroups_2024-Update
Glyma.08G264701 No alias jasmonate-zim-domain protein 1 0.02 Orthogroups_2024-Update
Glyma.17G047700 No alias jasmonate-zim-domain protein 1 0.06 Orthogroups_2024-Update
HORVU7Hr1G041260.6 No alias Unknown function 0.01 Orthogroups_2024-Update
LOC_Os03g08310 No alias ZIM domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os03g08320 No alias ZIM domain containing protein, putative, expressed 0.04 Orthogroups_2024-Update
LOC_Os03g08330 No alias ZIM domain containing protein, putative, expressed 0.04 Orthogroups_2024-Update
LOC_Os03g28940 No alias ZIM domain containing protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os10g25230 No alias ZIM domain containing protein, putative, expressed 0.03 Orthogroups_2024-Update
MA_10426545g0010 No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
MA_10426545g0020 No alias no hits & (original description: no original description) 0.06 Orthogroups_2024-Update
MA_10427283g0030 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_116760g0010 No alias no hits & (original description: no original description) 0.05 Orthogroups_2024-Update
MA_137163g0010 No alias (at1g70700 : 84.0) JAZ9 is a protein presumed to be... 0.05 Orthogroups_2024-Update
MA_1854g0020 No alias no hits & (original description: no original description) 0.06 Orthogroups_2024-Update
MA_19887g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_469601g0010 No alias no hits & (original description: no original description) 0.09 Orthogroups_2024-Update
MA_470613g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_68496g0010 No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
MA_8355655g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00002963-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00003984-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00032766-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00045652-RA No alias (at1g70700 : 80.1) JAZ9 is a protein presumed to be... 0.05 Orthogroups_2024-Update
PSME_00049415-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
Potri.001G166200 No alias jasmonate-zim-domain protein 5 0.03 Orthogroups_2024-Update
Pp1s442_14V6 No alias MEB5.8; expressed protein [Arabidopsis thaliana] 0.03 Orthogroups_2024-Update
Pp1s88_114V6 No alias MEB5.8; expressed protein [Arabidopsis thaliana] 0.04 Orthogroups_2024-Update
Seita.2G388400.1 No alias component *(JAZ) of jasmonic acid receptor complex &... 0.04 Orthogroups_2024-Update
Seita.9G251600.1 No alias TIFY-type transcription factor 0.03 Orthogroups_2024-Update
Seita.9G252500.1 No alias component *(JAZ) of jasmonic acid receptor complex &... 0.07 Orthogroups_2024-Update
Seita.9G371000.1 No alias component *(JAZ) of jasmonic acid receptor complex &... 0.05 Orthogroups_2024-Update
Seita.9G518000.1 No alias TIFY-type transcription factor 0.03 Orthogroups_2024-Update
Seita.9G518100.1 No alias TIFY-type transcription factor 0.04 Orthogroups_2024-Update
Sobic.001G482600.1 No alias TIFY-type transcription factor 0.02 Orthogroups_2024-Update
Sobic.001G482700.1 No alias TIFY-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.002G374100.1 No alias component *(JAZ) of jasmonic acid receptor complex &... 0.03 Orthogroups_2024-Update
Solyc12g009220 No alias jasmonate ZIM-domain protein 1 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
MF GO:0004888 transmembrane signaling receptor activity IEP Predicted GO
MF GO:0004970 ionotropic glutamate receptor activity IEP Predicted GO
MF GO:0005216 ion channel activity IEP Predicted GO
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
MF GO:0008066 glutamate receptor activity IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
BP GO:0009690 cytokinin metabolic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010817 regulation of hormone levels IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
MF GO:0019139 cytokinin dehydrogenase activity IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0022824 transmitter-gated ion channel activity IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022835 transmitter-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
MF GO:0030594 neurotransmitter receptor activity IEP Predicted GO
BP GO:0034754 cellular hormone metabolic process IEP Predicted GO
MF GO:0038023 signaling receptor activity IEP Predicted GO
BP GO:0042445 hormone metabolic process IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0045735 nutrient reservoir activity IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
MF GO:0060089 molecular transducer activity IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR010399 Tify_dom 121 153
IPR018467 CCT_CS 207 228
No external refs found!