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  5. PSME_00046097-RA

PSME_00046097-RA


Description : (at3g27460 : 99.4) SGF29 tudor-like domain; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: SAGA-associated factor 29 (InterPro:IPR010750); BEST Arabidopsis thaliana protein match is: SGF29 tudor-like domain (TAIR:AT5G40550.2); Has 324 Blast hits to 324 proteins in 148 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 113; Plants - 51; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink). & (reliability: 198.8) & (original description: no original description)


Gene families : OG_42_0129204 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00046097-RA
Cluster HCCA clusters: Cluster_211


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0003909 DNA ligase activity IEP Predicted GO
MF GO:0003910 DNA ligase (ATP) activity IEP Predicted GO
MF GO:0004190 aspartic-type endopeptidase activity IEP Predicted GO
MF GO:0004568 chitinase activity IEP Predicted GO
MF GO:0005543 phospholipid binding IEP Predicted GO
MF GO:0005544 calcium-dependent phospholipid binding IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
BP GO:0006310 DNA recombination IEP Predicted GO
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
MF GO:0070001 aspartic-type peptidase activity IEP Predicted GO
MF GO:0140097 catalytic activity, acting on DNA IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR010750 SGF29_tudor-like_dom 94 142
No external refs found!