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  5. PSME_00046293-RA

PSME_00046293-RA


Description : (at5g11540 : 461.0) D-arabinono-1,4-lactone oxidase family protein; FUNCTIONS IN: D-arabinono-1,4-lactone oxidase activity, oxidoreductase activity, FAD binding, catalytic activity; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: D-arabinono-1,4-lactone oxidase (InterPro:IPR007173), FAD-binding, type 2 (InterPro:IPR016166), Plant-specific FAD-dependent oxidoreductase (InterPro:IPR010030), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: D-arabinono-1,4-lactone oxidase family protein (TAIR:AT2G46740.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 922.0) & (original description: no original description)


Gene families : OG_42_0000298 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000298_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00046293-RA
Cluster HCCA clusters: Cluster_57

Target Alias Description ECC score Gene Family Method Actions
123507 No alias D-arabinono-1,4-lactone oxidase family protein 0.03 Orthogroups_2024-Update
MA_1356g0010 No alias (at2g46750 : 648.0) D-arabinono-1,4-lactone oxidase... 0.03 Orthogroups_2024-Update
MA_275703g0010 No alias (at2g46740 : 308.0) D-arabinono-1,4-lactone oxidase... 0.02 Orthogroups_2024-Update
MA_39485g0010 No alias (at2g46750 : 207.0) D-arabinono-1,4-lactone oxidase... 0.04 Orthogroups_2024-Update
MA_425144g0010 No alias (at2g46750 : 315.0) D-arabinono-1,4-lactone oxidase... 0.04 Orthogroups_2024-Update
MA_47198g0010 No alias (at2g46740 : 612.0) D-arabinono-1,4-lactone oxidase... 0.02 Orthogroups_2024-Update
PSME_00046504-RA No alias (at1g32300 : 282.0) D-arabinono-1,4-lactone oxidase... 0.03 Orthogroups_2024-Update
PSME_00047113-RA No alias (at1g32300 : 350.0) D-arabinono-1,4-lactone oxidase... 0.03 Orthogroups_2024-Update
PSME_00053362-RA No alias (at2g46760 : 611.0) D-arabinono-1,4-lactone oxidase... 0.02 Orthogroups_2024-Update
Pp1s96_200V6 No alias fad binding domain containing protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
MF GO:0016491 oxidoreductase activity IEA InterProScan predictions
MF GO:0050660 flavin adenine dinucleotide binding IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
InterPro domains Description Start Stop
IPR006094 Oxid_FAD_bind_N 54 184
IPR007173 ALO 405 541
No external refs found!