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  5. PSME_00046411-RA

PSME_00046411-RA


Description : (at1g09430 : 226.0) Encodes subunit A of the heteromeric enzyme ATP citrate lyase (ACL). In animals, ACL is encoded by a single gene; ACL in Arabidopsis is composed of two polypeptides, ACLA (encoded by 3 genes) and ACLB (encoded by 2 genes). The holoenzyme has an A(4)B(4)stoichiometry. Expression of both ACLA and ACLB but not of either of the subunits alone results in ACL activity.; ATP-citrate lyase A-3 (ACLA-3); CONTAINS InterPro DOMAIN/s: ATP-grasp fold, subdomain 2 (InterPro:IPR013816), ATP-grasp fold, succinyl-CoA synthetase-type (InterPro:IPR013650), Succinyl-CoA synthetase-like (InterPro:IPR016102); BEST Arabidopsis thaliana protein match is: ATP-citrate lyase A-1 (TAIR:AT1G10670.4); Has 5303 Blast hits to 5302 proteins in 1635 species: Archae - 133; Bacteria - 3235; Metazoa - 230; Fungi - 139; Plants - 96; Viruses - 0; Other Eukaryotes - 1470 (source: NCBI BLink). & (reliability: 452.0) & (original description: no original description)


Gene families : OG_42_0002348 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002348_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00046411-RA
Cluster HCCA clusters: Cluster_146

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G107082 No alias ATP-citrate lyase A-3 0.02 Orthogroups_2024-Update
Mp5g21210.1 No alias alpha chain of ATP-dependent citrate lyase complex 0.01 Orthogroups_2024-Update
Pp1s63_54V6 No alias at1g09430 f19j9_9 0.02 Orthogroups_2024-Update
Sobic.005G222200.1 No alias subunit alpha of ATP-dependent citrate lyase complex 0.03 Orthogroups_2024-Update
Solyc05g005160 No alias ATP-citrate synthase, putative (AHRD V3.3 *** B9SHC9_RICCO) 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004807 triose-phosphate isomerase activity IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
MF GO:0016860 intramolecular oxidoreductase activity IEP Predicted GO
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Predicted GO
InterPro domains Description Start Stop
IPR013650 ATP-grasp_succ-CoA_synth-type 43 164
No external refs found!