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  5. PSME_00046418-RA

PSME_00046418-RA


Description : (at5g16990 : 279.0) molecular function has not been defined, was shown involved in oxidative stress tolerance.; Zinc-binding dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, binding, zinc ion binding, catalytic activity; INVOLVED IN: response to oxidative stress; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), NAD(P)-binding domain (InterPro:IPR016040), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: alkenal reductase (TAIR:AT5G16970.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 558.0) & (original description: no original description)


Gene families : OG_42_0000332 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000332_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00046418-RA
Cluster HCCA clusters: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
HORVU3Hr1G015640.4 No alias EC_1.3 oxidoreductase acting on CH-CH group of donor 0.02 Orthogroups_2024-Update
Kfl00405_0090 kfl00405_0090_v1.1 (at5g17000 : 343.0) Zinc-binding dehydrogenase family... 0.02 Orthogroups_2024-Update
evm.model.tig00020807.17 No alias (at1g65560 : 190.0) Zinc-binding dehydrogenase family... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003872 6-phosphofructokinase activity IEP Predicted GO
MF GO:0004779 sulfate adenylyltransferase activity IEP Predicted GO
MF GO:0004781 sulfate adenylyltransferase (ATP) activity IEP Predicted GO
CC GO:0005643 nuclear pore IEP Predicted GO
BP GO:0006270 DNA replication initiation IEP Predicted GO
BP GO:0006405 RNA export from nucleus IEP Predicted GO
BP GO:0006406 mRNA export from nucleus IEP Predicted GO
MF GO:0008378 galactosyltransferase activity IEP Predicted GO
MF GO:0008443 phosphofructokinase activity IEP Predicted GO
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Predicted GO
MF GO:0016851 magnesium chelatase activity IEP Predicted GO
BP GO:0016973 poly(A)+ mRNA export from nucleus IEP Predicted GO
MF GO:0019200 carbohydrate kinase activity IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
BP GO:0050657 nucleic acid transport IEP Predicted GO
BP GO:0050658 RNA transport IEP Predicted GO
MF GO:0051002 ligase activity, forming nitrogen-metal bonds IEP Predicted GO
MF GO:0051003 ligase activity, forming nitrogen-metal bonds, forming coordination complexes IEP Predicted GO
BP GO:0051028 mRNA transport IEP Predicted GO
BP GO:0051168 nuclear export IEP Predicted GO
BP GO:0051236 establishment of RNA localization IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
MF GO:0070566 adenylyltransferase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR013149 ADH_C 173 224
No external refs found!