PSME_00046495-RA

Description : (at4g04450 : 144.0) member of WRKY Transcription Factor; Group II-b; WRKY42; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 31 (TAIR:AT4G22070.1); Has 3599 Blast hits to 3152 proteins in 220 species: Archae - 0; Bacteria - 6; Metazoa - 41; Fungi - 2; Plants - 3474; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink). & (reliability: 288.0) & (original description: no original description)

Gene families : OG_42_0000005 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Pseudotsuga release: PSME_00046495-RA
Cluster	HCCA clusters: Cluster_180

Target	Alias	Description	ECC score	Gene Family Method
At3g58710	No alias	WRKY69 [Source:UniProtKB/TrEMBL;Acc:A0A178V7K8]	0.03	Orthogroups_2024-Update
Bradi2g18530	No alias	WRKY DNA-binding protein 51	0.03	Orthogroups_2024-Update
Glyma.06G307700	No alias	WRKY family transcription factor	0.04	Orthogroups_2024-Update
Glyma.09G080000	No alias	WRKY family transcription factor	0.06	Orthogroups_2024-Update
Glyma.20G163200	No alias	WRKY family transcription factor	0.05	Orthogroups_2024-Update
MA_114377g0010	No alias	no hits & (original description: no original description)	0.03	Orthogroups_2024-Update
MA_175750g0010	No alias	(at1g62300 : 137.0) Encodes a transcription factor...	0.02	Orthogroups_2024-Update
MA_381058g0010	No alias	(at1g68150 : 80.5) member of WRKY Transcription Factor;...	0.02	Orthogroups_2024-Update
PSME_00035158-RA	No alias	(at3g01970 : 114.0) member of WRKY Transcription Factor;...	0.05	Orthogroups_2024-Update
Sopen01g024140	No alias	WRKY DNA -binding domain	0.03	Orthogroups_2024-Update
Sopen10g005370	No alias	WRKY DNA -binding domain	0.05	Orthogroups_2024-Update
Sopen10g005700	No alias	WRKY DNA -binding domain	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	InterProScan predictions
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0003824	catalytic activity	IEP	Predicted GO
MF	GO:0004386	helicase activity	IEP	Predicted GO
MF	GO:0004672	protein kinase activity	IEP	Predicted GO
BP	GO:0006468	protein phosphorylation	IEP	Predicted GO
BP	GO:0006793	phosphorus metabolic process	IEP	Predicted GO
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	Predicted GO
MF	GO:0009055	electron transfer activity	IEP	Predicted GO
MF	GO:0016301	kinase activity	IEP	Predicted GO
BP	GO:0016310	phosphorylation	IEP	Predicted GO
MF	GO:0016491	oxidoreductase activity	IEP	Predicted GO
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	Predicted GO
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	160	216

External Links

No external refs found!

PSME_00046495-RA

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation