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  5. PSME_00046504-RA

PSME_00046504-RA


Description : (at1g32300 : 282.0) D-arabinono-1,4-lactone oxidase family protein; FUNCTIONS IN: oxidoreductase activity, D-arabinono-1,4-lactone oxidase activity, FAD binding, catalytic activity; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: D-arabinono-1,4-lactone oxidase (InterPro:IPR007173), FAD-binding, type 2 (InterPro:IPR016166), Plant-specific FAD-dependent oxidoreductase (InterPro:IPR010030), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: D-arabinono-1,4-lactone oxidase family protein (TAIR:AT5G56490.1); Has 2573 Blast hits to 2542 proteins in 768 species: Archae - 19; Bacteria - 1742; Metazoa - 82; Fungi - 220; Plants - 254; Viruses - 0; Other Eukaryotes - 256 (source: NCBI BLink). & (reliability: 564.0) & (original description: no original description)


Gene families : OG_42_0000298 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000298_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00046504-RA
Cluster HCCA clusters: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
411796 No alias D-arabinono-1,4-lactone oxidase family protein 0.02 Orthogroups_2024-Update
A4A49_24189 No alias putative l-gulonolactone oxidase 6 0.02 Orthogroups_2024-Update
A4A49_61647 No alias putative l-gulonolactone oxidase 6 0.03 Orthogroups_2024-Update
Brara.B01267.1 No alias L-gulono-1,4-lactone oxidase *(GULLO) 0.03 Orthogroups_2024-Update
MA_10435381g0010 No alias (at5g11540 : 302.0) D-arabinono-1,4-lactone oxidase... 0.02 Orthogroups_2024-Update
MA_275703g0010 No alias (at2g46740 : 308.0) D-arabinono-1,4-lactone oxidase... 0.03 Orthogroups_2024-Update
PSME_00016148-RA No alias (at2g46740 : 331.0) D-arabinono-1,4-lactone oxidase... 0.04 Orthogroups_2024-Update
PSME_00017353-RA No alias (at2g46750 : 415.0) D-arabinono-1,4-lactone oxidase... 0.09 Orthogroups_2024-Update
PSME_00017892-RA No alias (at2g46760 : 560.0) D-arabinono-1,4-lactone oxidase... 0.04 Orthogroups_2024-Update
PSME_00023834-RA No alias (at2g46740 : 333.0) D-arabinono-1,4-lactone oxidase... 0.05 Orthogroups_2024-Update
PSME_00029450-RA No alias (at1g32300 : 258.0) D-arabinono-1,4-lactone oxidase... 0.05 Orthogroups_2024-Update
PSME_00033907-RA No alias (at1g32300 : 380.0) D-arabinono-1,4-lactone oxidase... 0.05 Orthogroups_2024-Update
PSME_00038856-RA No alias (at2g46740 : 358.0) D-arabinono-1,4-lactone oxidase... 0.04 Orthogroups_2024-Update
PSME_00041480-RA No alias (at1g32300 : 115.0) D-arabinono-1,4-lactone oxidase... 0.05 Orthogroups_2024-Update
PSME_00044474-RA No alias (at2g46740 : 125.0) D-arabinono-1,4-lactone oxidase... 0.04 Orthogroups_2024-Update
PSME_00046293-RA No alias (at5g11540 : 461.0) D-arabinono-1,4-lactone oxidase... 0.03 Orthogroups_2024-Update
Sobic.008G145900.1 No alias L-gulono-1,4-lactone oxidase *(GULLO) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004519 endonuclease activity IEP Predicted GO
MF GO:0004521 endoribonuclease activity IEP Predicted GO
MF GO:0004540 ribonuclease activity IEP Predicted GO
BP GO:0007062 sister chromatid cohesion IEP Predicted GO
BP GO:0007064 mitotic sister chromatid cohesion IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
BP GO:0022402 cell cycle process IEP Predicted GO
CC GO:0031390 Ctf18 RFC-like complex IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
BP GO:1903047 mitotic cell cycle process IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!