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  5. PSME_00046546-RA

PSME_00046546-RA


Description : (at1g74470 : 706.0) Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate.; Pyridine nucleotide-disulphide oxidoreductase family protein; FUNCTIONS IN: geranylgeranyl reductase activity; INVOLVED IN: chlorophyll biosynthetic process; LOCATED IN: chloroplast thylakoid membrane, chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Geranylgeranyl reductase (InterPro:IPR010253), Geranylgeranyl reductase, plant/cyanobacteria (InterPro:IPR011774), Geranylgeranyl reductase, plant/prokaryotic (InterPro:IPR011777); Has 4540 Blast hits to 4539 proteins in 1185 species: Archae - 562; Bacteria - 2644; Metazoa - 5; Fungi - 25; Plants - 302; Viruses - 0; Other Eukaryotes - 1002 (source: NCBI BLink). & (reliability: 1412.0) & (original description: no original description)


Gene families : OG_42_0003500 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003500_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00046546-RA
Cluster HCCA clusters: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
At1g74470 No alias Geranylgeranyl diphosphate reductase, chloroplastic... 0.02 Orthogroups_2024-Update
Bradi3g59430 No alias Pyridine nucleotide-disulphide oxidoreductase family protein 0.04 Orthogroups_2024-Update
Cre01.g050950 No alias Pyridine nucleotide-disulphide oxidoreductase family protein 0.02 Orthogroups_2024-Update
MA_189742g0010 No alias (at1g74470 : 705.0) Encodes for a multifunctional... 0.04 Orthogroups_2024-Update
Pp1s100_107V6 No alias geranylgeranyl reductase 0.02 Orthogroups_2024-Update
Pp1s425_20V6 No alias geranylgeranyl reductase 0.03 Orthogroups_2024-Update
Seita.1G318400.1 No alias geranylgeranyl reductase *(CHLP) 0.03 Orthogroups_2024-Update
Sobic.004G238500.1 No alias geranylgeranyl reductase *(CHLP) 0.03 Orthogroups_2024-Update
Solyc03g115980 No alias Geranylgeranyl reductase (AHRD V3.3 *** A0A097P6G1_SOLHA) 0.03 Orthogroups_2024-Update
evm.model.tig00000144.20 No alias (at1g74470 : 559.0) Encodes for a multifunctional... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0071949 FAD binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP Predicted GO
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
BP GO:0006720 isoprenoid metabolic process IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0009538 photosystem I reaction center IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR002938 FAD-bd 104 136
No external refs found!