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  5. PSME_00046657-RA

PSME_00046657-RA


Description : (at2g39210 : 308.0) Major facilitator superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transmembrane transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nodulin-like (InterPro:IPR010658), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G28120.1); Has 3072 Blast hits to 2927 proteins in 685 species: Archae - 32; Bacteria - 1223; Metazoa - 36; Fungi - 288; Plants - 601; Viruses - 0; Other Eukaryotes - 892 (source: NCBI BLink). & (reliability: 616.0) & (original description: no original description)


Gene families : OG_42_0000169 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000169_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00046657-RA
Cluster HCCA clusters: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
79408 No alias Major facilitator superfamily protein 0.02 Orthogroups_2024-Update
89661 No alias Major facilitator superfamily protein 0.03 Orthogroups_2024-Update
At2g28120 No alias At2g28120/F24D13.9 [Source:UniProtKB/TrEMBL;Acc:Q9ZUV4] 0.04 Orthogroups_2024-Update
Brara.C00608.1 No alias UMF23-type solute transporter 0.02 Orthogroups_2024-Update
Brara.D02085.1 No alias UMF23-type solute transporter 0.05 Orthogroups_2024-Update
Brara.F01340.1 No alias UMF23-type solute transporter 0.02 Orthogroups_2024-Update
Brara.J02036.1 No alias UMF23-type solute transporter 0.02 Orthogroups_2024-Update
Glyma.02G164400 No alias Major facilitator superfamily protein 0.03 Orthogroups_2024-Update
Glyma.10G276600 No alias Major facilitator superfamily protein 0.04 Orthogroups_2024-Update
Glyma.19G092100 No alias Major facilitator superfamily protein 0.02 Orthogroups_2024-Update
HORVU2Hr1G069980.1 No alias UMF23-type solute transporter 0.05 Orthogroups_2024-Update
HORVU5Hr1G106960.3 No alias UMF23-type solute transporter 0.02 Orthogroups_2024-Update
Kfl00450_0080 kfl00450_0080_v1.1 (at5g14120 : 320.0) Major facilitator superfamily... 0.01 Orthogroups_2024-Update
LOC_Os12g44060 No alias nodulin, putative, expressed 0.04 Orthogroups_2024-Update
MA_481350g0010 No alias (at2g28120 : 219.0) Major facilitator superfamily... 0.04 Orthogroups_2024-Update
PSME_00003395-RA No alias (at2g39210 : 458.0) Major facilitator superfamily... 0.03 Orthogroups_2024-Update
PSME_00020952-RA No alias (at2g39210 : 423.0) Major facilitator superfamily... 0.03 Orthogroups_2024-Update
PSME_00037920-RA No alias (at2g39210 : 561.0) Major facilitator superfamily... 0.05 Orthogroups_2024-Update
PSME_00051277-RA No alias (at2g39210 : 629.0) Major facilitator superfamily... 0.05 Orthogroups_2024-Update
Seita.3G405800.1 No alias UMF23-type solute transporter 0.03 Orthogroups_2024-Update
Solyc05g055540 No alias Major facilitator superfamily protein (AHRD V3.3 *** AT2G39210.1) 0.02 Orthogroups_2024-Update
Solyc11g008180 No alias LOW QUALITY:Major facilitator superfamily protein (AHRD... 0.04 Orthogroups_2024-Update
Sopen03g029970 No alias Nodulin-like 0.03 Orthogroups_2024-Update
Sopen05g033980 No alias Nodulin-like 0.04 Orthogroups_2024-Update
Sopen10g033390 No alias Nodulin-like 0.02 Orthogroups_2024-Update
Sopen10g033400 No alias Nodulin-like 0.02 Orthogroups_2024-Update
Sopen11g003970 No alias Major Facilitator Superfamily 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Predicted GO
BP GO:0000097 sulfur amino acid biosynthetic process IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP Predicted GO
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0006555 methionine metabolic process IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
MF GO:0008172 S-methyltransferase activity IEP Predicted GO
BP GO:0009066 aspartate family amino acid metabolic process IEP Predicted GO
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Predicted GO
BP GO:0009086 methionine biosynthetic process IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
BP GO:0044272 sulfur compound biosynthetic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR010658 Nodulin-like 14 277
No external refs found!