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  5. PSME_00046734-RA

PSME_00046734-RA


Description : (at2g30990 : 115.0) Protein of unknown function (DUF688); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 (InterPro:IPR007789); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF688) (TAIR:AT1G29240.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 230.0) & (original description: no original description)


Gene families : OG_42_0003476 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003476_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00046734-RA
Cluster HCCA clusters: Cluster_176

Target Alias Description ECC score Gene Family Method Actions
At2g30990 No alias Protein of unknown function (DUF688) [Source:TAIR;Acc:AT2G30990] 0.02 Orthogroups_2024-Update
Brara.D01865.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.E01005.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.H01959.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Glyma.12G128800 No alias Protein of unknown function (DUF688) 0.01 Orthogroups_2024-Update
Glyma.13G290300 No alias Protein of unknown function (DUF688) 0.04 Orthogroups_2024-Update
LOC_Os01g55410 No alias expressed protein 0.03 Orthogroups_2024-Update
Seita.5G324800.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc07g055140 No alias DUF688 family protein (AHRD V3.3 *** G7JCM3_MEDTR) 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
BP GO:0006486 protein glycosylation IEP Predicted GO
MF GO:0008373 sialyltransferase activity IEP Predicted GO
BP GO:0043413 macromolecule glycosylation IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0070085 glycosylation IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR007789 DUF688 83 597
No external refs found!