PSME_00046780-RA

Description : (at4g10780 : 218.0) LRR and NB-ARC domains-containing disease resistance protein; FUNCTIONS IN: nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: N-terminal protein myristoylation, defense response, apoptosis; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT1G12220.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 426.0) & (original description: no original description)

Gene families : OG_42_0000113 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000113_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Pseudotsuga release: PSME_00046780-RA
Cluster	HCCA clusters: Cluster_83

Target	Alias	Description	ECC score	Gene Family Method
At1g63350	No alias	Disease resistance protein (CC-NBS-LRR class) family...	0.04	Orthogroups_2024-Update
Brara.F00866.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Glyma.09G258200	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.03	Orthogroups_2024-Update
HORVU3Hr1G108500.3	No alias	Unknown function	0.05	Orthogroups_2024-Update
LOC_Os03g10900	No alias	disease resistance protein, putative, expressed	0.04	Orthogroups_2024-Update
MA_451961g0010	No alias	(at1g12280 : 177.0) LRR and NB-ARC domains-containing...	0.03	Orthogroups_2024-Update
MA_53162g0010	No alias	no hits & (original description: no original description)	0.05	Orthogroups_2024-Update
MA_53162g0020	No alias	(at5g43740 : 114.0) Disease resistance protein...	0.03	Orthogroups_2024-Update
PSME_00000865-RA	No alias	no hits & (original description: no original description)	0.03	Orthogroups_2024-Update
PSME_00004005-RA	No alias	(at1g15890 : 219.0) Disease resistance protein...	0.05	Orthogroups_2024-Update
PSME_00011883-RA	No alias	(at4g27220 : 218.0) NB-ARC domain-containing disease...	0.03	Orthogroups_2024-Update
PSME_00027124-RA	No alias	(at4g10780 : 169.0) LRR and NB-ARC domains-containing...	0.03	Orthogroups_2024-Update
PSME_00033628-RA	No alias	(at4g27220 : 254.0) NB-ARC domain-containing disease...	0.03	Orthogroups_2024-Update
Potri.001G313301	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.03	Orthogroups_2024-Update
Potri.011G124100	No alias	NB-ARC domain-containing disease resistance protein	0.03	Orthogroups_2024-Update
Potri.T014500	No alias	LRR and NB-ARC domains-containing disease resistance protein	0.02	Orthogroups_2024-Update
Potri.T026800	No alias	LRR and NB-ARC domains-containing disease resistance protein	0.03	Orthogroups_2024-Update
Potri.T026900	No alias	NB-ARC domain-containing disease resistance protein	0.03	Orthogroups_2024-Update
Potri.T052600	No alias	NB-ARC domain-containing disease resistance protein	0.02	Orthogroups_2024-Update
Sopen08g004810	No alias	NB-ARC domain	0.04	Orthogroups_2024-Update
Sopen10g028090	No alias	NB-ARC domain	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	InterProScan predictions
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004664	prephenate dehydratase activity	IEP	Predicted GO
MF	GO:0005506	iron ion binding	IEP	Predicted GO
BP	GO:0006558	L-phenylalanine metabolic process	IEP	Predicted GO
BP	GO:0006952	defense response	IEP	Predicted GO
BP	GO:0008652	cellular amino acid biosynthetic process	IEP	Predicted GO
BP	GO:0009072	aromatic amino acid family metabolic process	IEP	Predicted GO
BP	GO:0009073	aromatic amino acid family biosynthetic process	IEP	Predicted GO
BP	GO:0009094	L-phenylalanine biosynthetic process	IEP	Predicted GO
BP	GO:0009095	aromatic amino acid family biosynthetic process, prephenate pathway	IEP	Predicted GO
MF	GO:0015035	protein disulfide oxidoreductase activity	IEP	Predicted GO
MF	GO:0015036	disulfide oxidoreductase activity	IEP	Predicted GO
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Predicted GO
MF	GO:0016835	carbon-oxygen lyase activity	IEP	Predicted GO
MF	GO:0016836	hydro-lyase activity	IEP	Predicted GO
CC	GO:0031225	anchored component of membrane	IEP	Predicted GO
CC	GO:0031226	intrinsic component of plasma membrane	IEP	Predicted GO
MF	GO:0043565	sequence-specific DNA binding	IEP	Predicted GO
CC	GO:0046658	anchored component of plasma membrane	IEP	Predicted GO
BP	GO:1901605	alpha-amino acid metabolic process	IEP	Predicted GO
BP	GO:1901607	alpha-amino acid biosynthetic process	IEP	Predicted GO
BP	GO:1902221	erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process	IEP	Predicted GO
BP	GO:1902223	erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	185	423

External Links

No external refs found!

PSME_00046780-RA

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation