PSME_00046831-RA

Description : (q5z9s8|pdr12_orysa : 439.0) Pleiotropic drug resistance protein 12 - Oryza sativa (Rice) & (at1g59870 : 436.0) ATP binding cassette transporter. Localized to the plasma membrane in uninfected cells. In infected leaves, the protein concentrated at infection sites. Contributes to nonhost resistance to inappropriate pathogens that enter by direct penetration in a salicylic acidÃ±dependent manner. Required for mlo resistance. Has Cd transporter activity (Cd2+ extrusion pump) and contributes to heavy metal resistance.; PENETRATION 3 (PEN3); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, cadmium ion transmembrane transporter activity; INVOLVED IN: in 9 processes; LOCATED IN: mitochondrion, plasma membrane, chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), Plant PDR ABC transporter associated (InterPro:IPR013581), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: pleiotropic drug resistance 7 (TAIR:AT1G15210.1); Has 392230 Blast hits to 282257 proteins in 3986 species: Archae - 7583; Bacteria - 315608; Metazoa - 9692; Fungi - 7346; Plants - 6702; Viruses - 4; Other Eukaryotes - 45295 (source: NCBI BLink). & (reliability: 872.0) & (original description: no original description)

Gene families : OG_42_0000055 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000055_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Pseudotsuga release: PSME_00046831-RA
Cluster	HCCA clusters: Cluster_154

Target	Alias	Description	ECC score	Gene Family Method
Bradi2g43150	No alias	pleiotropic drug resistance 12	0.02	Orthogroups_2024-Update
Cre17.g728400	No alias	pleiotropic drug resistance 3	0.01	Orthogroups_2024-Update
Glyma.07G033500	No alias	pleiotropic drug resistance 12	0.03	Orthogroups_2024-Update
LOC_Os01g42410	No alias	pleiotropic drug resistance protein, putative, expressed	0.02	Orthogroups_2024-Update
PSME_00000869-RA	No alias	(q5z9s8\|pdr12_orysa : 1879.0) Pleiotropic drug...	0.03	Orthogroups_2024-Update
PSME_00009192-RA	No alias	(q8gu88\|pdr7_orysa : 1875.0) Putative pleiotropic drug...	0.05	Orthogroups_2024-Update
PSME_00013320-RA	No alias	(q8gu88\|pdr7_orysa : 1886.0) Putative pleiotropic drug...	0.04	Orthogroups_2024-Update
Pp1s160_34V6	No alias	atp-binding cassette	0.02	Orthogroups_2024-Update
Seita.1G041000.1	No alias	subfamily ABCG transporter	0.04	Orthogroups_2024-Update
Seita.5G221500.1	No alias	subfamily ABCG transporter	0.03	Orthogroups_2024-Update
Seita.9G283100.1	No alias	subfamily ABCG transporter	0.04	Orthogroups_2024-Update
evm.model.tig00000057.108	No alias	(at3g16340 : 255.0) pleiotropic drug resistance 1...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	InterProScan predictions
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0008144	drug binding	None	Extended
CC	GO:0016020	membrane	IEA	InterProScan predictions
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATPase activity	IEA	InterProScan predictions
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0004672	protein kinase activity	IEP	Predicted GO
BP	GO:0006464	cellular protein modification process	IEP	Predicted GO
BP	GO:0006468	protein phosphorylation	IEP	Predicted GO
BP	GO:0006793	phosphorus metabolic process	IEP	Predicted GO
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	Predicted GO
MF	GO:0016301	kinase activity	IEP	Predicted GO
BP	GO:0016310	phosphorylation	IEP	Predicted GO
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Predicted GO
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Predicted GO
BP	GO:0036211	protein modification process	IEP	Predicted GO
BP	GO:0043412	macromolecule modification	IEP	Predicted GO
MF	GO:0043531	ADP binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR013525	ABC_2_trans	284	325
IPR003439	ABC_transporter-like	14	166

External Links

No external refs found!

PSME_00046831-RA

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation