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  5. PSME_00046926-RA

PSME_00046926-RA


Description : (at3g62660 : 485.0) Encodes a protein with putative galacturonosyltransferase activity.; galacturonosyltransferase-like 7 (GATL7); FUNCTIONS IN: transferase activity, transferring hexosyl groups, polygalacturonate 4-alpha-galacturonosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galacturonosyltransferase 5 (TAIR:AT1G02720.2); Has 1817 Blast hits to 1811 proteins in 371 species: Archae - 0; Bacteria - 732; Metazoa - 289; Fungi - 4; Plants - 732; Viruses - 0; Other Eukaryotes - 60 (source: NCBI BLink). & (reliability: 970.0) & (original description: no original description)


Gene families : OG_42_0000386 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000386_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00046926-RA
Cluster HCCA clusters: Cluster_86

Target Alias Description ECC score Gene Family Method Actions
234804 No alias galacturonosyltransferase 6 0.03 Orthogroups_2024-Update
A4A49_07106 No alias putative galacturonosyltransferase-like 7 0.05 Orthogroups_2024-Update
At3g62660 No alias Probable galacturonosyltransferase-like 7... 0.04 Orthogroups_2024-Update
Brara.I00322.1 No alias galacturonosyltransferase 0.03 Orthogroups_2024-Update
GRMZM2G108576 No alias galacturonosyltransferase-like 4 0.03 Orthogroups_2024-Update
Glyma.01G178700 No alias galacturonosyltransferase-like 2 0.04 Orthogroups_2024-Update
Seita.7G178200.1 No alias galacturonosyltransferase 0.03 Orthogroups_2024-Update
Seita.9G434200.1 No alias galacturonosyltransferase 0.02 Orthogroups_2024-Update
Sopen02g015730 No alias Glycosyl transferase family 8 0.03 Orthogroups_2024-Update
Sopen09g030350 No alias Glycosyl transferase family 8 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016757 transferase activity, transferring glycosyl groups IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Predicted GO
CC GO:0000159 protein phosphatase type 2A complex IEP Predicted GO
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Predicted GO
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Predicted GO
CC GO:0008287 protein serine/threonine phosphatase complex IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
MF GO:0019208 phosphatase regulator activity IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
MF GO:0019888 protein phosphatase regulator activity IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
CC GO:0044459 plasma membrane part IEP Predicted GO
CC GO:0098797 plasma membrane protein complex IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
CC GO:1903293 phosphatase complex IEP Predicted GO
CC GO:1990234 transferase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR002495 Glyco_trans_8 93 348
No external refs found!