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  5. PSME_00047009-RA

PSME_00047009-RA


Description : (at3g60670 : 176.0) PLATZ transcription factor family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF597 (InterPro:IPR006734); BEST Arabidopsis thaliana protein match is: PLATZ transcription factor family protein (TAIR:AT2G12646.1); Has 407 Blast hits to 407 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 407; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 352.0) & (original description: no original description)


Gene families : OG_42_0000211 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000211_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00047009-RA
Cluster HCCA clusters: Cluster_203

Target Alias Description ECC score Gene Family Method Actions
425306 No alias PLATZ transcription factor family protein 0.05 Orthogroups_2024-Update
Brara.G02180.1 No alias PLATZ-type transcription factor 0.02 Orthogroups_2024-Update
Brara.K00478.1 No alias PLATZ-type transcription factor 0.03 Orthogroups_2024-Update
Glyma.15G200100 No alias PLATZ transcription factor family protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G050480.1 No alias PLATZ-type transcription factor 0.03 Orthogroups_2024-Update
LOC_Os02g10000 No alias zinc-binding protein, putative, expressed 0.05 Orthogroups_2024-Update
MA_14309g0010 No alias (at2g12646 : 254.0) PLATZ transcription factor family... 0.03 Orthogroups_2024-Update
Potri.006G060500 No alias PLATZ transcription factor family protein 0.04 Orthogroups_2024-Update
Seita.1G279800.1 No alias PLATZ-type transcription factor 0.02 Orthogroups_2024-Update
Seita.9G311100.1 No alias PLATZ-type transcription factor 0.04 Orthogroups_2024-Update
Sobic.004G067800.1 No alias PLATZ-type transcription factor 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0004888 transmembrane signaling receptor activity IEP Predicted GO
MF GO:0004970 ionotropic glutamate receptor activity IEP Predicted GO
MF GO:0005092 GDP-dissociation inhibitor activity IEP Predicted GO
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP Predicted GO
MF GO:0005216 ion channel activity IEP Predicted GO
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
MF GO:0008066 glutamate receptor activity IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022824 transmitter-gated ion channel activity IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022835 transmitter-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
MF GO:0030594 neurotransmitter receptor activity IEP Predicted GO
MF GO:0030695 GTPase regulator activity IEP Predicted GO
MF GO:0038023 signaling receptor activity IEP Predicted GO
MF GO:0060089 molecular transducer activity IEP Predicted GO
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR006734 DUF597 90 161
No external refs found!