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  5. PSME_00047016-RA

PSME_00047016-RA


Description : no hits & (original description: no original description)


Gene families : OG_42_0000477 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000477_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00047016-RA
Cluster HCCA clusters: Cluster_87

Target Alias Description ECC score Gene Family Method Actions
A4A49_03152 No alias hypothetical protein 0.04 Orthogroups_2024-Update
At2g20430 No alias CRIB domain-containing protein RIC6... 0.03 Orthogroups_2024-Update
GRMZM2G145346 No alias PAK-box/P21-Rho-binding family protein 0.03 Orthogroups_2024-Update
Glyma.08G259300 No alias ROP-interactive CRIB motif-containing protein 4 0.03 Orthogroups_2024-Update
Potri.002G233400 No alias ROP-interactive CRIB motif-containing protein 4 0.04 Orthogroups_2024-Update
Potri.010G069500 No alias ROP-interactive CRIB motif-containing protein 1 0.03 Orthogroups_2024-Update
Potri.019G053300 No alias ROP-interactive CRIB motif-containing protein 4 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004556 alpha-amylase activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0005984 disaccharide metabolic process IEP Predicted GO
BP GO:0005985 sucrose metabolic process IEP Predicted GO
BP GO:0006072 glycerol-3-phosphate metabolic process IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
BP GO:0009311 oligosaccharide metabolic process IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
MF GO:0016157 sucrose synthase activity IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0035251 UDP-glucosyltransferase activity IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0046168 glycerol-3-phosphate catabolic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
BP GO:0052646 alditol phosphate metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000095 CRIB_dom 121 153
No external refs found!