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  5. PSME_00047021-RA

PSME_00047021-RA


Description : (at4g33260 : 422.0) putative cdc20 protein (CDC20.2); CDC20.2; FUNCTIONS IN: signal transducer activity; INVOLVED IN: signal transduction; LOCATED IN: heterotrimeric G-protein complex; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin family protein / WD-40 repeat family protein (TAIR:AT4G33270.1). & (reliability: 838.0) & (original description: no original description)


Gene families : OG_42_0000946 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000946_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00047021-RA

Target Alias Description ECC score Gene Family Method Actions
LOC_Os02g47180 No alias WD repeat-containing protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os09g06680 No alias WD domain, G-beta repeat domain containing protein, expressed 0.02 Orthogroups_2024-Update
MA_138205g0010 No alias (at4g33260 : 549.0) putative cdc20 protein (CDC20.2);... 0.02 Orthogroups_2024-Update
MA_95353g0010 No alias (at4g33260 : 445.0) putative cdc20 protein (CDC20.2);... 0.02 Orthogroups_2024-Update
PSME_00024119-RA No alias (at4g33270 : 434.0) putative cdc20 protein (CDC20.1);... 0.03 Orthogroups_2024-Update
Seita.1G285900.1 No alias substrate specificity component *(CDC20) of APC/C E3... 0.02 Orthogroups_2024-Update
Seita.7G223300.1 No alias substrate specificity component *(CDC20) of APC/C E3... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001680 WD40_repeat 324 359
IPR001680 WD40_repeat 234 274
IPR001680 WD40_repeat 189 223
No external refs found!