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  5. PSME_00047022-RA

PSME_00047022-RA


Description : (at5g63810 : 103.0) member of Glycoside Hydrolase Family 35; beta-galactosidase 10 (BGAL10); FUNCTIONS IN: cation binding, beta-galactosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: response to karrikin; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase, family 35 (InterPro:IPR001944), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: beta-galactosidase 8 (TAIR:AT2G28470.1); Has 2086 Blast hits to 2065 proteins in 466 species: Archae - 15; Bacteria - 851; Metazoa - 358; Fungi - 207; Plants - 597; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). & (p49676|bgal_braol : 95.5) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) - Brassica oleracea (Wild cabbage) & (reliability: 200.0) & (original description: no original description)


Gene families : OG_42_0000109 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000109_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00047022-RA
Cluster HCCA clusters: Cluster_164

Target Alias Description ECC score Gene Family Method Actions
Bradi2g56597 No alias beta-galactosidase 16 0.02 Orthogroups_2024-Update
Brara.G01582.1 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
GRMZM2G162238 No alias beta-galactosidase 7 0.02 Orthogroups_2024-Update
MA_72251g0010 No alias (at2g28470 : 966.0) putative beta-galactosidase (BGAL8... 0.03 Orthogroups_2024-Update
PSME_00005883-RA No alias (at4g36360 : 486.0) putative beta-galactosidase (BGAL3... 0.05 Orthogroups_2024-Update
PSME_00017488-RA No alias (at4g36360 : 1137.0) putative beta-galactosidase (BGAL3... 0.04 Orthogroups_2024-Update
PSME_00030788-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
Solyc10g055470 No alias Beta-galactosidase (AHRD V3.3 *** M1A6P4_SOLTU) 0.02 Orthogroups_2024-Update
Sopen03g029730 No alias Glycosyl hydrolases family 35 0.03 Orthogroups_2024-Update
Sopen03g040350 No alias Glycosyl hydrolases family 35 0.03 Orthogroups_2024-Update
Sopen11g028000 No alias Glycosyl hydrolases family 35 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Predicted GO
MF GO:0004402 histone acetyltransferase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
MF GO:0008080 N-acetyltransferase activity IEP Predicted GO
MF GO:0016407 acetyltransferase activity IEP Predicted GO
MF GO:0016410 N-acyltransferase activity IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0034212 peptide N-acetyltransferase activity IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!