1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00047149-RA

PSME_00047149-RA


Description : (at2g04570 : 278.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT2G42990.1); Has 3619 Blast hits to 3578 proteins in 263 species: Archae - 0; Bacteria - 457; Metazoa - 0; Fungi - 32; Plants - 3114; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (p40603|apg_brana : 209.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 556.0) & (original description: no original description)


Gene families : OG_42_0000214 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000214_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00047149-RA

Target Alias Description ECC score Gene Family Method Actions
At4g26790 No alias GDSL esterase/lipase At4g26790... 0.03 Orthogroups_2024-Update
Bradi3g06550 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.02 Orthogroups_2024-Update
Brara.G02199.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.06G022700 No alias SGNH hydrolase-type esterase superfamily protein 0.02 Orthogroups_2024-Update
Glyma.06G022800 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.02 Orthogroups_2024-Update
Glyma.14G051000 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.02 Orthogroups_2024-Update
Glyma.17G259500 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.05 Orthogroups_2024-Update
Glyma.17G259600 No alias SGNH hydrolase-type esterase superfamily protein 0.03 Orthogroups_2024-Update
PSME_00028794-RA No alias (at4g26790 : 291.0) GDSL-like Lipase/Acylhydrolase... 0.03 Orthogroups_2024-Update
PSME_00040908-RA No alias (at2g04570 : 289.0) GDSL-like Lipase/Acylhydrolase... 0.04 Orthogroups_2024-Update
Solyc04g081770 No alias GDSL esterase/lipase (AHRD V3.3 *** A0A0B2SN40_GLYSO) 0.03 Orthogroups_2024-Update
Solyc07g049430 No alias GDSL esterase/lipase (AHRD V3.3 *** W9STE9_9ROSA) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016788 hydrolase activity, acting on ester bonds IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000776 kinetochore IEP Predicted GO
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0003777 microtubule motor activity IEP Predicted GO
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP Predicted GO
MF GO:0004618 phosphoglycerate kinase activity IEP Predicted GO
BP GO:0006928 movement of cell or subcellular component IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
BP GO:0007018 microtubule-based movement IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0008374 O-acyltransferase activity IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
MF GO:0016411 acylglycerol O-acyltransferase activity IEP Predicted GO
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Predicted GO
CC GO:0031262 Ndc80 complex IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
BP GO:0045017 glycerolipid biosynthetic process IEP Predicted GO
BP GO:0046486 glycerolipid metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001087 GDSL 37 348
No external refs found!