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PSME_00047152-RA


Description : (at5g27030 : 253.0) TOPLESS-related 3 (TPR3); FUNCTIONS IN: protein binding; INVOLVED IN: primary shoot apical meristem specification; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), CTLH, C-terminal LisH motif (InterPro:IPR006595), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: TOPLESS-related 2 (TAIR:AT3G16830.1). & (reliability: 506.0) & (original description: no original description)


Gene families : OG_42_0000373 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000373_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00047152-RA
Cluster HCCA clusters: Cluster_134

Target Alias Description ECC score Gene Family Method Actions
A4A49_28074 No alias topless-related protein 1 0.03 Orthogroups_2024-Update
HORVU7Hr1G022450.2 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os08g06480 No alias lissencephaly type-1-like homology motif, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00002684-RA No alias (at1g80490 : 246.0) TOPLESS-related 1 (TPR1); INVOLVED... 0.04 Orthogroups_2024-Update
Pp1s99_260V6 No alias tpl protein binding protein homodimerization... 0.03 Orthogroups_2024-Update
Sobic.007G051700.1 No alias auxin signalling transcriptional co-repressor *(TPL/TPR)... 0.04 Orthogroups_2024-Update
Solyc03g116750 No alias WD-repeat protein, putative (AHRD V3.3 *** B9SMF9_RICCO) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Predicted GO
BP GO:0008037 cell recognition IEP Predicted GO
BP GO:0022414 reproductive process IEP Predicted GO
BP GO:0035556 intracellular signal transduction IEP Predicted GO
BP GO:0048544 recognition of pollen IEP Predicted GO
InterPro domains Description Start Stop
IPR001680 WD40_repeat 43 80
No external refs found!