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  5. PSME_00047176-RA

PSME_00047176-RA


Description : (at2g14960 : 265.0) encodes a protein similar to IAA-amido synthases. Lines carrying an insertion in this gene are hypersensitive to auxin.; GH3.1; CONTAINS InterPro DOMAIN/s: GH3 auxin-responsive promoter (InterPro:IPR004993); BEST Arabidopsis thaliana protein match is: Auxin-responsive GH3 family protein (TAIR:AT4G37390.1); Has 1628 Blast hits to 1412 proteins in 230 species: Archae - 1; Bacteria - 595; Metazoa - 55; Fungi - 2; Plants - 676; Viruses - 0; Other Eukaryotes - 299 (source: NCBI BLink). & (q7xin9|gh38_orysa : 245.0) Probable indole-3-acetic acid-amido synthetase GH3.8 (EC 6.3.2.-) (Auxin-responsive GH3-like protein 8) (OsGH3-8) - Oryza sativa (Rice) & (reliability: 530.0) & (original description: no original description)


Gene families : OG_42_0000128 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000128_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00047176-RA

Target Alias Description ECC score Gene Family Method Actions
125443 No alias Auxin-responsive GH3 family protein 0.03 Orthogroups_2024-Update
A4A49_23173 No alias jasmonic acid-amido synthetase jar1 0.01 Orthogroups_2024-Update
A4A49_29559 No alias indole-3-acetic acid-amido synthetase gh3.6 0.01 Orthogroups_2024-Update
At1g48690 No alias At1g48690 [Source:UniProtKB/TrEMBL;Acc:Q9C737] 0.01 Orthogroups_2024-Update
At5g13360 No alias Auxin-responsive GH3 family protein... 0.02 Orthogroups_2024-Update
Brara.A01696.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.I04544.1 No alias indole-3-acetic acid-amido synthetase *(GH3) 0.02 Orthogroups_2024-Update
Brara.K00097.1 No alias indole-3-acetic acid-amido synthetase *(GH3) 0.02 Orthogroups_2024-Update
GRMZM2G053338 No alias Auxin-responsive GH3 family protein 0.03 Orthogroups_2024-Update
Glyma.01G190600 No alias Auxin-responsive GH3 family protein 0.02 Orthogroups_2024-Update
Glyma.06G260800 No alias Auxin-responsive GH3 family protein 0.02 Orthogroups_2024-Update
MA_10178158g0010 No alias (at5g54510 : 259.0) Encodes an IAA-amido synthase that... 0.01 Orthogroups_2024-Update
MA_16777g0010 No alias (at1g28130 : 670.0) encodes an IAA-amido synthase that... 0.01 Orthogroups_2024-Update
PSME_00028069-RA No alias (at5g54510 : 506.0) Encodes an IAA-amido synthase that... 0.02 Orthogroups_2024-Update
PSME_00043353-RA No alias (at5g54510 : 867.0) Encodes an IAA-amido synthase that... 0.02 Orthogroups_2024-Update
Potri.013G151100 No alias Auxin-responsive GH3 family protein 0.01 Orthogroups_2024-Update
Solyc10g009640 No alias Auxin-responsive GH3 family protein (AHRD V3.3 *** AT2G46370.4) 0.01 Orthogroups_2024-Update
Sopen10g005440 No alias GH3 auxin-responsive promoter 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP Predicted GO
InterPro domains Description Start Stop
IPR004993 GH3 21 180
No external refs found!