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  5. PSME_00047245-RA

PSME_00047245-RA


Description : (at1g77380 : 338.0) Amino acid permease which transports basic amino acids.; amino acid permease 3 (AAP3); CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: amino acid permease 2 (TAIR:AT5G09220.1); Has 2346 Blast hits to 2332 proteins in 227 species: Archae - 0; Bacteria - 15; Metazoa - 394; Fungi - 322; Plants - 1373; Viruses - 0; Other Eukaryotes - 242 (source: NCBI BLink). & (reliability: 676.0) & (original description: no original description)


Gene families : OG_42_0000170 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000170_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00047245-RA
Cluster HCCA clusters: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
Bradi1g37977 No alias amino acid permease 1 0.03 Orthogroups_2024-Update
Bradi1g45180 No alias amino acid permease 8 0.03 Orthogroups_2024-Update
Brara.B03869.1 No alias amino acid transporter *(AAP) 0.02 Orthogroups_2024-Update
Brara.I05240.1 No alias amino acid transporter *(AAP) 0.03 Orthogroups_2024-Update
Glyma.04G088200 No alias amino acid permease 6 0.02 Orthogroups_2024-Update
HORVU3Hr1G091110.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Mp6g14130.1 No alias amino acid transporter (AAP) 0.01 Orthogroups_2024-Update
PSME_00004044-RA No alias (at1g77380 : 466.0) Amino acid permease which transports... 0.05 Orthogroups_2024-Update
Sobic.008G059000.1 No alias amino acid transporter *(AAP) 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0003777 microtubule motor activity IEP Predicted GO
MF GO:0004519 endonuclease activity IEP Predicted GO
MF GO:0004521 endoribonuclease activity IEP Predicted GO
MF GO:0004540 ribonuclease activity IEP Predicted GO
BP GO:0006928 movement of cell or subcellular component IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
BP GO:0007018 microtubule-based movement IEP Predicted GO
BP GO:0007062 sister chromatid cohesion IEP Predicted GO
BP GO:0007064 mitotic sister chromatid cohesion IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
BP GO:0022402 cell cycle process IEP Predicted GO
CC GO:0031390 Ctf18 RFC-like complex IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
BP GO:1903047 mitotic cell cycle process IEP Predicted GO
InterPro domains Description Start Stop
IPR013057 AA_transpt_TM 44 122
IPR013057 AA_transpt_TM 143 374
No external refs found!