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  5. PSME_00047265-RA

PSME_00047265-RA


Description : (at2g26690 : 637.0) Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: response to jasmonic acid stimulus, response to wounding; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: nitrate transporter 1.1 (TAIR:AT1G12110.1); Has 7265 Blast hits to 7134 proteins in 1412 species: Archae - 0; Bacteria - 3658; Metazoa - 494; Fungi - 438; Plants - 2171; Viruses - 0; Other Eukaryotes - 504 (source: NCBI BLink). & (reliability: 1274.0) & (original description: no original description)


Gene families : OG_42_0000015 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000015_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00047265-RA
Cluster HCCA clusters: Cluster_352

Target Alias Description ECC score Gene Family Method Actions
415640 No alias peptide transporter 5 0.03 Orthogroups_2024-Update
A4A49_37441 No alias protein nrt1 ptr family 6.3 0.02 Orthogroups_2024-Update
Bradi2g56347 No alias Major facilitator superfamily protein 0.02 Orthogroups_2024-Update
Bradi5g01737 No alias Major facilitator superfamily protein 0.02 Orthogroups_2024-Update
Glyma.02G269700 No alias Major facilitator superfamily protein 0.03 Orthogroups_2024-Update
Glyma.07G139100 No alias Major facilitator superfamily protein 0.02 Orthogroups_2024-Update
Glyma.17G153300 No alias nitrate transporter 1.5 0.02 Orthogroups_2024-Update
Glyma.18G300400 No alias Major facilitator superfamily protein 0.03 Orthogroups_2024-Update
HORVU3Hr1G010830.2 No alias anion transporter *(NRT1/PTR) 0.03 Orthogroups_2024-Update
MA_186200g0010 No alias (at5g46040 : 355.0) Major facilitator superfamily... 0.02 Orthogroups_2024-Update
MA_927631g0010 No alias (at5g46050 : 227.0) Encodes a di- and tri-peptide... 0.03 Orthogroups_2024-Update
Mp5g08940.1 No alias anion transporter (NRT1/PTR) 0.02 Orthogroups_2024-Update
PSME_00043344-RA No alias (at3g54140 : 493.0) Encodes a di- and tri-peptide... 0.04 Orthogroups_2024-Update
PSME_00044025-RA No alias (at2g37900 : 373.0) Major facilitator superfamily... 0.03 Orthogroups_2024-Update
Potri.013G106900 No alias Major facilitator superfamily protein 0.03 Orthogroups_2024-Update
Pp1s298_45V6 No alias nitrate transporter 0.02 Orthogroups_2024-Update
Pp1s75_22V6 No alias peptide transport-like protein 0.02 Orthogroups_2024-Update
Seita.7G221900.1 No alias anion transporter *(NRT1/PTR) 0.02 Orthogroups_2024-Update
Solyc07g008520 No alias Peptide transporter (AHRD V3.3 *** W9RPK3_9ROSA) 0.02 Orthogroups_2024-Update
Sopen08g003010 No alias POT family 0.02 Orthogroups_2024-Update
Sopen08g003380 No alias POT family 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA InterProScan predictions
MF GO:0022857 transmembrane transporter activity IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004126 cytidine deaminase activity IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
BP GO:0005984 disaccharide metabolic process IEP Predicted GO
BP GO:0005985 sucrose metabolic process IEP Predicted GO
BP GO:0006213 pyrimidine nucleoside metabolic process IEP Predicted GO
BP GO:0006216 cytidine catabolic process IEP Predicted GO
MF GO:0008146 sulfotransferase activity IEP Predicted GO
BP GO:0009164 nucleoside catabolic process IEP Predicted GO
BP GO:0009311 oligosaccharide metabolic process IEP Predicted GO
BP GO:0009972 cytidine deamination IEP Predicted GO
MF GO:0016157 sucrose synthase activity IEP Predicted GO
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Predicted GO
BP GO:0034656 nucleobase-containing small molecule catabolic process IEP Predicted GO
BP GO:0042454 ribonucleoside catabolic process IEP Predicted GO
BP GO:0046087 cytidine metabolic process IEP Predicted GO
BP GO:0046131 pyrimidine ribonucleoside metabolic process IEP Predicted GO
BP GO:0046133 pyrimidine ribonucleoside catabolic process IEP Predicted GO
BP GO:0046135 pyrimidine nucleoside catabolic process IEP Predicted GO
BP GO:0072529 pyrimidine-containing compound catabolic process IEP Predicted GO
BP GO:1901658 glycosyl compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000109 POT_fam 102 526
No external refs found!