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  5. PSME_00047280-RA

PSME_00047280-RA


Description : (at4g23180 : 180.0) Encodes a receptor-like protein kinase. Naming convention from Chen et al 2003 (PMID 14756307); cysteine-rich RLK (RECEPTOR-like protein kinase) 10 (CRK10); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 8 (TAIR:AT4G23160.1); Has 124145 Blast hits to 122467 proteins in 4564 species: Archae - 110; Bacteria - 14159; Metazoa - 45299; Fungi - 10862; Plants - 34986; Viruses - 473; Other Eukaryotes - 18256 (source: NCBI BLink). & (reliability: 360.0) & (original description: no original description)


Gene families : OG_42_0000473 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000473_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00047280-RA
Cluster HCCA clusters: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
HORVU3Hr1G006620.1 No alias Unknown function 0.02 Orthogroups_2024-Update
PSME_00027887-RA No alias (at3g22060 : 100.0) contains Pfam profile: PF01657... 0.03 Orthogroups_2024-Update
PSME_00052770-RA No alias (at3g22060 : 145.0) contains Pfam profile: PF01657... 0.05 Orthogroups_2024-Update
Potri.007G120400 No alias Receptor-like protein kinase-related family protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEA InterProScan predictions
BP GO:0006468 protein phosphorylation IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0006260 DNA replication IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR002902 GNK2 216 307
IPR002902 GNK2 102 197
IPR001245 Ser-Thr/Tyr_kinase_cat_dom 420 482
No external refs found!