1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00047327-RA

PSME_00047327-RA


Description : (at5g17540 : 379.0) HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, F mature embryo stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: acetyl CoA:(Z)-3-hexen-1-ol acetyltransferase (TAIR:AT3G03480.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (o24645|hcbt1_diaca : 176.0) Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 758.0) & (original description: no original description)


Gene families : OG_42_0000573 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000573_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00047327-RA
Cluster HCCA clusters: Cluster_70

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G122503 No alias HXXXD-type acyl-transferase family protein 0.03 Orthogroups_2024-Update
LOC_Os07g36560 No alias transferase family protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_160101g0010 No alias (at5g17540 : 371.0) HXXXD-type acyl-transferase family... 0.03 Orthogroups_2024-Update
MA_165363g0010 No alias (at5g17540 : 371.0) HXXXD-type acyl-transferase family... 0.02 Orthogroups_2024-Update
MA_197986g0010 No alias (at5g17540 : 367.0) HXXXD-type acyl-transferase family... 0.07 Orthogroups_2024-Update
MA_49773g0010 No alias (at5g17540 : 368.0) HXXXD-type acyl-transferase family... 0.07 Orthogroups_2024-Update
MA_9429908g0010 No alias (at5g17540 : 155.0) HXXXD-type acyl-transferase family... 0.05 Orthogroups_2024-Update
PSME_00016038-RA No alias (at5g17540 : 299.0) HXXXD-type acyl-transferase family... 0.03 Orthogroups_2024-Update
PSME_00044824-RA No alias (at5g17540 : 300.0) HXXXD-type acyl-transferase family... 0.03 Orthogroups_2024-Update
Potri.013G074300 No alias HXXXD-type acyl-transferase family protein 0.02 Orthogroups_2024-Update
Potri.013G112100 No alias HXXXD-type acyl-transferase family protein 0.04 Orthogroups_2024-Update
Potri.019G043600 No alias HXXXD-type acyl-transferase family protein 0.03 Orthogroups_2024-Update
Seita.9G200700.1 No alias EC_2.3 acyltransferase 0.03 Orthogroups_2024-Update
Sobic.010G259600.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
BP GO:0001101 response to acid chemical IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
BP GO:0009415 response to water IEP Predicted GO
BP GO:0009628 response to abiotic stimulus IEP Predicted GO
BP GO:0010035 response to inorganic substance IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:1901700 response to oxygen-containing compound IEP Predicted GO
InterPro domains Description Start Stop
IPR003480 Transferase 7 432
No external refs found!