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  5. Sopen06g013320

Sopen06g013320


Description : Retrotransposon gag protein


Gene families : OG_42_0000977 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000977_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen06g013320
Cluster HCCA clusters: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
137874 No alias ribulose-bisphosphate carboxylases 0.05 Orthogroups_2024-Update
Bradi1g39206 No alias ribulose-bisphosphate carboxylases 0.05 Orthogroups_2024-Update
HORVU0Hr1G036870.1 No alias Unknown function 0.03 Orthogroups_2024-Update
PSME_00008423-RA No alias (q70xz5|rbl_ambtc : 335.0) Ribulose bisphosphate... 0.04 Orthogroups_2024-Update
PSME_00014645-RA No alias (p41621|rbl_pinth : 216.0) Ribulose bisphosphate... 0.06 Orthogroups_2024-Update
PSME_00018769-RA No alias (p56648|rbl_vitvi : 182.0) Ribulose bisphosphate... 0.07 Orthogroups_2024-Update
Seita.J020800.1 No alias large subunit of ribulose-1,5-bisphosphat... 0.03 Orthogroups_2024-Update
Solyc01g007330 No alias No description available 0.07 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR005162 Retrotrans_gag_dom 102 162
No external refs found!