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  5. PSME_00047662-RA

PSME_00047662-RA


Description : (q03773|e13a_soybn : 194.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Glycine max (Soybean) & (at4g16260 : 192.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: defense response to fungus, incompatible interaction, response to salt stress; LOCATED IN: cell wall, plasma membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-1,3-glucanase 1 (TAIR:AT3G57270.1); Has 2169 Blast hits to 2154 proteins in 141 species: Archae - 0; Bacteria - 6; Metazoa - 5; Fungi - 22; Plants - 2121; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 354.0) & (original description: no original description)


Gene families : OG_42_0000200 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000200_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00047662-RA
Cluster HCCA clusters: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
MA_10337257g0010 No alias (p49237|e13b_maize : 232.0) Glucan... 0.02 Orthogroups_2024-Update
MA_475809g0010 No alias (at4g16260 : 249.0) Glycosyl hydrolase superfamily... 0.02 Orthogroups_2024-Update
MA_795943g0010 No alias (p49237|e13b_maize : 198.0) Glucan... 0.02 Orthogroups_2024-Update
PSME_00010153-RA No alias (p15797|e13b_tobac : 286.0) Glucan... 0.03 Orthogroups_2024-Update
Pp1s26_167V6 No alias glucan endo- -beta-glucosidase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0019725 cellular homeostasis IEP Predicted GO
BP GO:0042592 homeostatic process IEP Predicted GO
BP GO:0045454 cell redox homeostasis IEP Predicted GO
InterPro domains Description Start Stop
IPR000490 Glyco_hydro_17 197 342
IPR000490 Glyco_hydro_17 5 97
IPR000490 Glyco_hydro_17 110 189
No external refs found!