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  5. PSME_00047671-RA

PSME_00047671-RA


Description : (at4g37800 : 399.0) xyloglucan endotransglucosylase/hydrolase 7 (XTH7); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 6 (TAIR:AT5G65730.1); Has 2144 Blast hits to 2126 proteins in 283 species: Archae - 0; Bacteria - 226; Metazoa - 0; Fungi - 448; Plants - 1383; Viruses - 0; Other Eukaryotes - 87 (source: NCBI BLink). & (q41638|xtha_phaan : 308.0) Xyloglucan endotransglucosylase/hydrolase protein A precursor (EC 2.4.1.207) (VaXTH1) - Phaseolus angularis (Adzuki bean) (Vigna angularis) & (reliability: 798.0) & (original description: no original description)


Gene families : OG_42_0000032 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000032_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00047671-RA
Cluster HCCA clusters: Cluster_190

Target Alias Description ECC score Gene Family Method Actions
267868 No alias xyloglucan endotransglucosylase/hydrolase 5 0.02 Orthogroups_2024-Update
A4A49_21656 No alias xyloglucan endotransglucosylasehydrolase protein 24 0.03 Orthogroups_2024-Update
Bradi1g33810 No alias Xyloglucan endotransglucosylase/hydrolase family protein 0.02 Orthogroups_2024-Update
Brara.H02756.1 No alias EC_2.4 glycosyltransferase 0.02 Orthogroups_2024-Update
GRMZM2G128876 No alias xyloglucan endotransglucosylase/hydrolase 25 0.02 Orthogroups_2024-Update
Glyma.09G062600 No alias xyloglucan endotransglycosylase 6 0.03 Orthogroups_2024-Update
Glyma.16G045100 No alias xyloglucan endotransglucosylase/hydrolase 5 0.03 Orthogroups_2024-Update
LOC_Os06g48200 No alias glycosyl hydrolases family 16, putative, expressed 0.02 Orthogroups_2024-Update
Mp2g21520.1 No alias Enzyme classification.EC_2 transferases.EC_2.4... 0.03 Orthogroups_2024-Update
PSME_00001209-RA No alias (at4g03210 : 309.0) encodes a member of xyloglucan... 0.04 Orthogroups_2024-Update
PSME_00016554-RA No alias (at2g36870 : 288.0) xyloglucan... 0.04 Orthogroups_2024-Update
PSME_00022622-RA No alias (q41638|xtha_phaan : 479.0) Xyloglucan... 0.04 Orthogroups_2024-Update
PSME_00022999-RA No alias (at5g57530 : 289.0) xyloglucan... 0.04 Orthogroups_2024-Update
PSME_00028627-RA No alias (q41638|xtha_phaan : 479.0) Xyloglucan... 0.02 Orthogroups_2024-Update
Potri.005G201200 No alias xyloglucan endotransglucosylase/hydrolase 15 0.02 Orthogroups_2024-Update
Pp1s168_54V6 No alias xyloglucan endotransglucosylase hydrolase protein a 0.02 Orthogroups_2024-Update
Pp1s410_28V6 No alias Probable xyloglucan endotransglucosylase/hydrolase... 0.02 Orthogroups_2024-Update
Sobic.010G246700.1 No alias EC_2.4 glycosyltransferase 0.02 Orthogroups_2024-Update
Solyc07g006850 No alias Xyloglucan endotransglucosylase/hydrolase (AHRD V3.3 *-*... 0.02 Orthogroups_2024-Update
Solyc07g006860 No alias Xyloglucan endotransglucosylase/hydrolase (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc11g065600 No alias xyloglucan endotransglucosylase-hydrolase 4 0.02 Orthogroups_2024-Update
Solyc12g007250 No alias Xyloglucan endotransglucosylase/hydrolase (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Sopen03g023920 No alias Glycosyl hydrolases family 16 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA InterProScan predictions
CC GO:0005618 cell wall IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
BP GO:0006073 cellular glucan metabolic process IEA InterProScan predictions
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEA InterProScan predictions
CC GO:0048046 apoplast IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
BP GO:0006721 terpenoid metabolic process IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
BP GO:0016114 terpenoid biosynthetic process IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0016744 transferase activity, transferring aldehyde or ketonic groups IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
MF GO:0043015 gamma-tubulin binding IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
InterPro domains Description Start Stop
IPR000757 GH16 33 213
IPR010713 XET_C 239 286
No external refs found!