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  5. PSME_00047714-RA

PSME_00047714-RA


Description : (q06509|comt1_maize : 221.0) Caffeic acid 3-O-methyltransferase (EC 2.1.1.68) (S-adenosysl-L-methionine:caffeic acid 3-O-methyltransferase) (COMT) (CAOMT) - Zea mays (Maize) & (at5g54160 : 217.0) A caffeic acid/5-hydroxyferulic acid O-methyltransferase. Interacts with 14-4-3 proteins in yeast 2 hybrid assay. AtOMT1 (At5g54160) encodes a flavonol 3í-O-methyltransferase that is highly active towards quercetin and myricetin. The substrate specificity identifies the enzyme as flavonol 3í-methyltransferase which replaces the former annotation of the gene to encode a caffeic acid/5-hydroxyferulic acid O-methyltransferase; O-methyltransferase 1 (OMT1); FUNCTIONS IN: myricetin 3'-O-methyltransferase activity, quercetin 3-O-methyltransferase activity, caffeate O-methyltransferase activity; INVOLVED IN: lignin biosynthetic process, flavonol biosynthetic process; LOCATED IN: cytosol, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase family protein (TAIR:AT1G77520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 434.0) & (original description: no original description)


Gene families : OG_42_0000016 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000016_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00047714-RA
Cluster HCCA clusters: Cluster_80

Target Alias Description ECC score Gene Family Method Actions
A4A49_32756 No alias trans-resveratrol di-o-methyltransferase 0.02 Orthogroups_2024-Update
Bradi1g22757 No alias O-methyltransferase family protein 0.02 Orthogroups_2024-Update
Bradi1g47030 No alias O-methyltransferase family protein 0.02 Orthogroups_2024-Update
Brara.G02172.1 No alias EC_2.1 transferase transferring one-carbon group 0.02 Orthogroups_2024-Update
Glyma.20G213500 No alias O-methyltransferase family protein 0.03 Orthogroups_2024-Update
HORVU6Hr1G090510.2 No alias EC_2.1 transferase transferring one-carbon group 0.02 Orthogroups_2024-Update
LOC_Os11g20040 No alias O-methyltransferase, putative, expressed 0.02 Orthogroups_2024-Update
MA_9153751g0010 No alias (q8w013|comt1_catro : 164.0) Caffeic acid... 0.02 Orthogroups_2024-Update
PSME_00015141-RA No alias (q8w013|comt1_catro : 194.0) Caffeic acid... 0.05 Orthogroups_2024-Update
PSME_00016370-RA No alias (q8w013|comt1_catro : 219.0) Caffeic acid... 0.04 Orthogroups_2024-Update
PSME_00016835-RA No alias (p28002|comt1_medsa : 153.0) Caffeic acid... 0.04 Orthogroups_2024-Update
PSME_00018014-RA No alias (q9fqy8|comt1_capan : 378.0) Caffeic acid... 0.03 Orthogroups_2024-Update
PSME_00018603-RA No alias (q8w013|comt1_catro : 247.0) Caffeic acid... 0.04 Orthogroups_2024-Update
PSME_00030764-RA No alias (q8w013|comt1_catro : 213.0) Caffeic acid... 0.04 Orthogroups_2024-Update
PSME_00032996-RA No alias (q8w013|comt1_catro : 410.0) Caffeic acid... 0.04 Orthogroups_2024-Update
PSME_00052449-RA No alias (q8w013|comt1_catro : 208.0) Caffeic acid... 0.04 Orthogroups_2024-Update
PSME_00052626-RA No alias (p28002|comt1_medsa : 204.0) Caffeic acid... 0.04 Orthogroups_2024-Update
PSME_00053053-RA No alias (p28002|comt1_medsa : 233.0) Caffeic acid... 0.04 Orthogroups_2024-Update
Potri.002G180600 No alias O-methyltransferase 1 0.02 Orthogroups_2024-Update
Sobic.003G298500.1 No alias EC_2.1 transferase transferring one-carbon group 0.01 Orthogroups_2024-Update
Sobic.007G058600.1 No alias EC_2.1 transferase transferring one-carbon group 0.02 Orthogroups_2024-Update
Solyc10g047520 No alias LOW QUALITY:O-methyltransferase (AHRD V3.3 *-* Q6VMV7_MENPI) 0.05 Orthogroups_2024-Update
Solyc12g041950 No alias O-methyltransferase (AHRD V3.3 *-* G4XGX0_VITVI) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008171 O-methyltransferase activity IEA InterProScan predictions
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003917 DNA topoisomerase type I activity IEP Predicted GO
MF GO:0003993 acid phosphatase activity IEP Predicted GO
MF GO:0004612 phosphoenolpyruvate carboxykinase (ATP) activity IEP Predicted GO
MF GO:0005244 voltage-gated ion channel activity IEP Predicted GO
MF GO:0005247 voltage-gated chloride channel activity IEP Predicted GO
MF GO:0005253 anion channel activity IEP Predicted GO
MF GO:0005254 chloride channel activity IEP Predicted GO
BP GO:0006821 chloride transport IEP Predicted GO
MF GO:0008308 voltage-gated anion channel activity IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
CC GO:0009579 thylakoid IEP Predicted GO
MF GO:0015108 chloride transmembrane transporter activity IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016791 phosphatase activity IEP Predicted GO
MF GO:0016830 carbon-carbon lyase activity IEP Predicted GO
MF GO:0016831 carboxy-lyase activity IEP Predicted GO
MF GO:0022832 voltage-gated channel activity IEP Predicted GO
MF GO:0042578 phosphoric ester hydrolase activity IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001077 O_MeTrfase_2 167 375
IPR012967 Plant_MeTrfase_dimerisation 46 107
No external refs found!