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  5. PSME_00047728-RA

PSME_00047728-RA


Description : (at1g23000 : 103.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT3G06130.1); Has 2286 Blast hits to 2008 proteins in 133 species: Archae - 0; Bacteria - 60; Metazoa - 111; Fungi - 41; Plants - 1285; Viruses - 0; Other Eukaryotes - 789 (source: NCBI BLink). & (reliability: 202.0) & (original description: no original description)


Gene families : OG_42_0000041 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000041_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00047728-RA
Cluster HCCA clusters: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
A4A49_34897 No alias heavy metal-associated isoprenylated plant protein 21 0.01 Orthogroups_2024-Update
At3g56240 No alias Copper transport protein CCH... 0.03 Orthogroups_2024-Update
At5g66110 No alias Heavy metal-associated isoprenylated plant protein 27... 0.04 Orthogroups_2024-Update
Bradi1g70700 No alias farnesylated protein 6 0.03 Orthogroups_2024-Update
Bradi2g53750 No alias Heavy metal transport/detoxification superfamily protein 0.03 Orthogroups_2024-Update
Brara.B00797.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Brara.F01638.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.J01674.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Glyma.02G160500 No alias copper chaperone 0.03 Orthogroups_2024-Update
Glyma.03G212400 No alias Heavy metal transport/detoxification superfamily protein 0.03 Orthogroups_2024-Update
Glyma.13G208400 No alias Heavy metal transport/detoxification superfamily protein 0.04 Orthogroups_2024-Update
Glyma.19G001000 No alias Heavy metal transport/detoxification superfamily protein 0.02 Orthogroups_2024-Update
Glyma.20G126300 No alias Heavy metal transport/detoxification superfamily protein 0.02 Orthogroups_2024-Update
HORVU1Hr1G021620.2 No alias Unknown function 0.05 Orthogroups_2024-Update
HORVU2Hr1G011060.2 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU3Hr1G004420.2 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU3Hr1G114920.2 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU5Hr1G040920.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU6Hr1G009000.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU7Hr1G082540.2 No alias copper chaperone *(ATX/CCH) 0.02 Orthogroups_2024-Update
LOC_Os02g32814 No alias heavy metal-associated domain containing protein, expressed 0.05 Orthogroups_2024-Update
LOC_Os11g05010 No alias heavy-metal-associated domain-containing protein,... 0.02 Orthogroups_2024-Update
MA_525649g0010 No alias (at2g28660 : 99.8) Chloroplast-targeted copper chaperone... 0.05 Orthogroups_2024-Update
MA_6646g0010 No alias (at3g06130 : 109.0) Heavy metal transport/detoxification... 0.03 Orthogroups_2024-Update
Mp2g12470.1 No alias no hits & (original description: none) 0.03 Orthogroups_2024-Update
Mp2g12480.1 No alias no hits & (original description: none) 0.01 Orthogroups_2024-Update
Potri.005G169700 No alias Heavy metal transport/detoxification superfamily protein 0.03 Orthogroups_2024-Update
Potri.007G087300 No alias Heavy metal transport/detoxification superfamily protein 0.04 Orthogroups_2024-Update
Potri.015G144300 No alias Heavy metal transport/detoxification superfamily protein 0.03 Orthogroups_2024-Update
Pp1s93_56V6 No alias heavy metal-associated domain containing expressed 0.02 Orthogroups_2024-Update
Seita.5G138300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.7G032600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc01g111600 No alias Heavy metal transport/detoxification superfamily protein... 0.03 Orthogroups_2024-Update
Solyc04g072700 No alias Heavy metal transport/detoxification superfamily protein... 0.03 Orthogroups_2024-Update
Solyc06g050710 No alias Tetratricopeptide repeat (TPR)-like superfamily protein... 0.03 Orthogroups_2024-Update
Sopen02g035920 No alias Heavy-metal-associated domain 0.02 Orthogroups_2024-Update
Sopen11g003110 No alias Heavy-metal-associated domain 0.03 Orthogroups_2024-Update
Sopen11g030670 No alias Heavy-metal-associated domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0030001 metal ion transport IEA InterProScan predictions
MF GO:0046872 metal ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0004556 alpha-amylase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0016779 nucleotidyltransferase activity IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR006121 HMA_dom 20 74
No external refs found!