1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00047804-RA

PSME_00047804-RA


Description : (at5g03795 : 442.0) Exostosin family protein; LOCATED IN: membrane; EXPRESSED IN: embryo, sepal, flower; EXPRESSED DURING: C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT3G07620.1); Has 1413 Blast hits to 1401 proteins in 109 species: Archae - 0; Bacteria - 9; Metazoa - 310; Fungi - 4; Plants - 989; Viruses - 0; Other Eukaryotes - 101 (source: NCBI BLink). & (reliability: 830.0) & (original description: no original description)


Gene families : OG_42_0000193 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000193_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00047804-RA
Cluster HCCA clusters: Cluster_149

Target Alias Description ECC score Gene Family Method Actions
445668 No alias Exostosin family protein 0.02 Orthogroups_2024-Update
A4A49_23691 No alias putative glycosyltransferase 0.03 Orthogroups_2024-Update
At5g11610 No alias Exostosin family protein [Source:UniProtKB/TrEMBL;Acc:Q9LYD1] 0.02 Orthogroups_2024-Update
Brara.F02762.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.H00675.1 No alias xylogalacturonan xylosyltransferase 0.04 Orthogroups_2024-Update
Glyma.10G064300 No alias Exostosin family protein 0.04 Orthogroups_2024-Update
LOC_Os02g39960 No alias exostosin family protein, putative, expressed 0.02 Orthogroups_2024-Update
Potri.018G025200 No alias Exostosin family protein 0.03 Orthogroups_2024-Update
Solyc12g019050 No alias Exostosin family protein (AHRD V3.3 *** AT3G42180.1) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006486 protein glycosylation IEA InterProScan predictions
MF GO:0016757 transferase activity, transferring glycosyl groups IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Predicted GO
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Predicted GO
MF GO:0004888 transmembrane signaling receptor activity IEP Predicted GO
MF GO:0004970 ionotropic glutamate receptor activity IEP Predicted GO
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Predicted GO
BP GO:0006835 dicarboxylic acid transport IEP Predicted GO
BP GO:0008037 cell recognition IEP Predicted GO
MF GO:0008066 glutamate receptor activity IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
BP GO:0015711 organic anion transport IEP Predicted GO
BP GO:0015740 C4-dicarboxylate transport IEP Predicted GO
BP GO:0015743 malate transport IEP Predicted GO
BP GO:0015849 organic acid transport IEP Predicted GO
MF GO:0016859 cis-trans isomerase activity IEP Predicted GO
BP GO:0018193 peptidyl-amino acid modification IEP Predicted GO
BP GO:0018208 peptidyl-proline modification IEP Predicted GO
BP GO:0022414 reproductive process IEP Predicted GO
MF GO:0022824 transmitter-gated ion channel activity IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022835 transmitter-gated channel activity IEP Predicted GO
MF GO:0030594 neurotransmitter receptor activity IEP Predicted GO
MF GO:0038023 signaling receptor activity IEP Predicted GO
BP GO:0046942 carboxylic acid transport IEP Predicted GO
BP GO:0048544 recognition of pollen IEP Predicted GO
MF GO:0060089 molecular transducer activity IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
InterPro domains Description Start Stop
IPR004263 Exostosin 169 451
No external refs found!