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  5. PSME_00047998-RA

PSME_00047998-RA


Description : (at2g38280 : 286.0) Encodes a protein with in vitro AMP deaminase activity that is involved in embryogenesis. Homozygous mutant embryos fail to develop past the zygote stage.; EMBRYONIC FACTOR1 (FAC1); FUNCTIONS IN: AMP deaminase activity; INVOLVED IN: purine ribonucleoside monophosphate biosynthetic process, embryo development ending in seed dormancy; LOCATED IN: cytosol, nucleus, microsome; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Adenosine/AMP deaminase (InterPro:IPR001365), Adenosine/AMP deaminase active site (InterPro:IPR006650), AMP deaminase (InterPro:IPR006329); Has 1191 Blast hits to 1128 proteins in 362 species: Archae - 0; Bacteria - 226; Metazoa - 390; Fungi - 271; Plants - 78; Viruses - 0; Other Eukaryotes - 226 (source: NCBI BLink). & (q84np7|ampd_orysa : 281.0) Probable AMP deaminase (EC 3.5.4.6) - Oryza sativa (Rice) & (reliability: 572.0) & (original description: no original description)


Gene families : OG_42_0003226 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003226_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00047998-RA
Cluster HCCA clusters: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
Pp1s168_82V6 No alias amp deaminase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0019239 deaminase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0001101 response to acid chemical IEP Predicted GO
MF GO:0004857 enzyme inhibitor activity IEP Predicted GO
BP GO:0006260 DNA replication IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
BP GO:0008612 peptidyl-lysine modification to peptidyl-hypusine IEP Predicted GO
BP GO:0009415 response to water IEP Predicted GO
BP GO:0009628 response to abiotic stimulus IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
BP GO:0010035 response to inorganic substance IEP Predicted GO
BP GO:0018193 peptidyl-amino acid modification IEP Predicted GO
BP GO:0018205 peptidyl-lysine modification IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0051604 protein maturation IEP Predicted GO
BP GO:1901700 response to oxygen-containing compound IEP Predicted GO
InterPro domains Description Start Stop
IPR001365 A/AMP_deaminase_dom 66 186
IPR001365 A/AMP_deaminase_dom 13 63
No external refs found!