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  5. PSME_00048054-RA

PSME_00048054-RA


Description : (at3g21420 : 319.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: senescence-related gene 1 (TAIR:AT1G17020.1); Has 8953 Blast hits to 8890 proteins in 1011 species: Archae - 0; Bacteria - 1172; Metazoa - 113; Fungi - 1056; Plants - 5016; Viruses - 0; Other Eukaryotes - 1596 (source: NCBI BLink). & (p31237|acco_actch : 215.0) 1-aminocyclopropane-1-carboxylate oxidase (EC 1.14.17.4) (ACC oxidase) (Ethylene-forming enzyme) (EFE) - Actinidia chinensis (Kiwi) (Yangtao) & (reliability: 638.0) & (original description: no original description)


Gene families : OG_42_0000290 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000290_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00048054-RA
Cluster HCCA clusters: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
Glyma.12G235100 No alias senescence-related gene 1 0.04 Orthogroups_2024-Update
Glyma.20G010900 No alias senescence-related gene 1 0.02 Orthogroups_2024-Update
MA_10431130g0010 No alias (at1g17010 : 291.0) 2-oxoglutarate (2OG) and... 0.03 Orthogroups_2024-Update
PSME_00033224-RA No alias (at3g21420 : 310.0) 2-oxoglutarate (2OG) and... 0.02 Orthogroups_2024-Update
Seita.5G028400.1 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.04 Orthogroups_2024-Update
Seita.9G324600.1 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.04 Orthogroups_2024-Update
Sobic.001G366100.2 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.03 Orthogroups_2024-Update
Sobic.003G143100.1 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.08 Orthogroups_2024-Update
Solyc02g071380 No alias 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP Predicted GO
MF GO:0004185 serine-type carboxypeptidase activity IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Predicted GO
InterPro domains Description Start Stop
IPR026992 DIOX_N 63 175
IPR005123 Oxoglu/Fe-dep_dioxygenase 225 322
No external refs found!