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  5. PSME_00048106-RA

PSME_00048106-RA


Description : (at2g39650 : 169.0) Protein of unknown function (DUF506) ; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF506, plant (InterPro:IPR006502); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF506) (TAIR:AT2G38820.2); Has 395 Blast hits to 393 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 393; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 338.0) & (original description: no original description)


Gene families : OG_42_0000147 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000147_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00048106-RA
Cluster HCCA clusters: Cluster_236

Target Alias Description ECC score Gene Family Method Actions
Brara.A03612.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Glyma.01G231800 No alias Protein of unknown function (DUF506) 0.03 Orthogroups_2024-Update
Glyma.07G197100 No alias Protein of unknown function (DUF506) 0.02 Orthogroups_2024-Update
LOC_Os11g25020 No alias plant-specific domain TIGR01615 family protein, expressed 0.04 Orthogroups_2024-Update
MA_120433g0010 No alias (at3g07350 : 163.0) Protein of unknown function (DUF506)... 0.04 Orthogroups_2024-Update
MA_16068g0010 No alias (at3g07350 : 182.0) Protein of unknown function (DUF506)... 0.04 Orthogroups_2024-Update
Mp7g07050.1 No alias no hits & (original description: none) 0.01 Orthogroups_2024-Update
Potri.004G184700 No alias Protein of unknown function (DUF506) 0.02 Orthogroups_2024-Update
Potri.010G080600 No alias Protein of unknown function (DUF506) 0.03 Orthogroups_2024-Update
Pp1s1630_1V6 No alias F17A14.2; expressed protein [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update
Pp1s206_108V6 No alias F5N5.17; expressed protein [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update
Pp1s222_136V6 No alias F17A14.2; expressed protein [Arabidopsis thaliana] 0.01 Orthogroups_2024-Update
Pp1s285_2V6 No alias F17A14.2; expressed protein [Arabidopsis thaliana] 0.03 Orthogroups_2024-Update
Seita.5G316100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.5G401700.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.9G055800.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.009G200900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sopen06g002480 No alias Protein of unknown function (DUF506) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
MF GO:0033897 ribonuclease T2 activity IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
MF GO:0046873 metal ion transmembrane transporter activity IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR006502 PDDEXK-like 99 303
No external refs found!