1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00048185-RA

PSME_00048185-RA


Description : (at2g41640 : 449.0) Glycosyltransferase family 61 protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyltransferase AER61, uncharacterised (InterPro:IPR007657); BEST Arabidopsis thaliana protein match is: Glycosyltransferase family 61 protein (TAIR:AT3G57380.1). & (reliability: 898.0) & (original description: no original description)


Gene families : OG_42_0000139 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000139_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00048185-RA
Cluster HCCA clusters: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
At2g03360 No alias Glycosyltransferase [Source:UniProtKB/TrEMBL;Acc:F4ISB4] 0.04 Orthogroups_2024-Update
At2g03370 No alias Glycosyltransferase (Fragment)... 0.03 Orthogroups_2024-Update
Bradi2g01387 No alias Glycosyltransferase family 61 protein 0.1 Orthogroups_2024-Update
Bradi2g13600 No alias Glycosyltransferase family 61 protein 0.03 Orthogroups_2024-Update
Bradi2g26590 No alias Glycosyltransferase family 61 protein 0.02 Orthogroups_2024-Update
Bradi3g03120 No alias Glycosyltransferase family 61 protein 0.04 Orthogroups_2024-Update
Bradi4g43180 No alias Glycosyltransferase family 61 protein 0.02 Orthogroups_2024-Update
GRMZM2G062552 No alias Glycosyltransferase family 61 protein 0.03 Orthogroups_2024-Update
GRMZM2G074896 No alias Glycosyltransferase family 61 protein 0.02 Orthogroups_2024-Update
GRMZM2G131055 No alias Glycosyltransferase family 61 protein 0.03 Orthogroups_2024-Update
HORVU2Hr1G023260.1 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU7Hr1G048430.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU7Hr1G048470.2 No alias xylan beta-1,2-xylosyltransferase 0.05 Orthogroups_2024-Update
LOC_Os01g72610 No alias glycosyltransferase, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os06g49320 No alias glycosyltransferase, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os10g35020 No alias glycosyltransferase, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00036521-RA No alias (at2g41640 : 447.0) Glycosyltransferase family 61... 0.03 Orthogroups_2024-Update
Potri.015G042300 No alias Glycosyltransferase family 61 protein 0.03 Orthogroups_2024-Update
Seita.1G095000.1 No alias Unknown function 0.08 Orthogroups_2024-Update
Seita.4G152100.1 No alias xylan beta-1,2-xylosyltransferase 0.03 Orthogroups_2024-Update
Seita.5G080000.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.5G080100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.5G080300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.5G080400.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.5G457700.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.003G431100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc10g080010 No alias Glycosyltransferase (AHRD V3.3 *** Q5QPZ6_MEDTR) 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016757 transferase activity, transferring glycosyl groups IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
BP GO:0010167 response to nitrate IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0015706 nitrate transport IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
BP GO:1901698 response to nitrogen compound IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR007657 Glycosyltransferase_61 242 490
No external refs found!