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  5. PSME_00048273-RA

PSME_00048273-RA


Description : (at5g20220 : 148.0) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding, zinc ion binding, nucleic acid binding; INVOLVED IN: protein folding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCHC-type (InterPro:IPR001878), Heat shock protein DnaJ, cysteine-rich domain (InterPro:IPR001305); Has 3073 Blast hits to 2296 proteins in 256 species: Archae - 0; Bacteria - 10; Metazoa - 639; Fungi - 640; Plants - 331; Viruses - 1155; Other Eukaryotes - 298 (source: NCBI BLink). & (reliability: 296.0) & (original description: no original description)


Gene families : OG_42_0009560 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009560_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Pseudotsuga release: PSME_00048273-RA
Cluster HCCA clusters: Cluster_208


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0005875 microtubule associated complex IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
CC GO:0030286 dynein complex IEP Predicted GO
CC GO:0044430 cytoskeletal part IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001878 Znf_CCHC 58 74
No external refs found!