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PSME_00048288-RA


Description : (at3g22360 : 222.0) encodes an alternative oxidase whose expression is limited to flowers and floral buds.; alternative oxidase 1B (AOX1B); CONTAINS InterPro DOMAIN/s: Alternative oxidase (InterPro:IPR002680); BEST Arabidopsis thaliana protein match is: alternative oxidase 1C (TAIR:AT3G27620.1); Has 1296 Blast hits to 1294 proteins in 245 species: Archae - 0; Bacteria - 111; Metazoa - 12; Fungi - 192; Plants - 375; Viruses - 0; Other Eukaryotes - 606 (source: NCBI BLink). & (q40578|aox2_tobac : 221.0) Alternative oxidase 2, mitochondrial precursor (EC 1.-.-.-) - Nicotiana tabacum (Common tobacco) & (reliability: 444.0) & (original description: no original description)


Gene families : OG_42_0001190 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001190_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00048288-RA
Cluster HCCA clusters: Cluster_129

Target Alias Description ECC score Gene Family Method Actions
Brara.E01720.1 No alias alternative oxidase *(AOx) 0.02 Orthogroups_2024-Update
HORVU0Hr1G005420.4 No alias alternative oxidase *(AOx) 0.03 Orthogroups_2024-Update
Mp7g14100.1 No alias alternative oxidase (AOx) 0.03 Orthogroups_2024-Update
Seita.1G286500.1 No alias alternative oxidase *(AOx) 0.03 Orthogroups_2024-Update
Solyc08g075550 No alias alternative oxidase 1au 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0009916 alternative oxidase activity IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002680 AOX 58 180
No external refs found!