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Description : (at1g10650 : 181.0) SBP (S-ribonuclease binding protein) family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), S-ribonuclease binding protein, SBP1, pollen (InterPro:IPR017066); BEST Arabidopsis thaliana protein match is: SBP (S-ribonuclease binding protein) family protein (TAIR:AT1G60610.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 362.0) & (original description: no original description)
Gene families : OG_42_0000224 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000224_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Pseudotsuga release: PSME_00048517-RA | |
| Cluster | HCCA clusters: Cluster_81 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| A4A49_02724 | No alias | hypothetical protein | 0.03 | Orthogroups_2024-Update | |
| Bradi5g08790 | No alias | SBP (S-ribonuclease binding protein) family protein | 0.03 | Orthogroups_2024-Update | |
| Brara.H00434.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| GRMZM2G095811 | No alias | zinc ion binding | 0.02 | Orthogroups_2024-Update | |
| GRMZM2G165063 | No alias | SBP (S-ribonuclease binding protein) family protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.01G029500 | No alias | SBP (S-ribonuclease binding protein) family protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.04G003600 | No alias | SBP (S-ribonuclease binding protein) family protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.11G039700 | No alias | SBP (S-ribonuclease binding protein) family protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.15G256500 | No alias | SBP (S-ribonuclease binding protein) family protein | 0.05 | Orthogroups_2024-Update | |
| LOC_Os03g15730 | No alias | S-RNase-binding protein, putative, expressed | 0.02 | Orthogroups_2024-Update | |
| MA_114475g0010 | No alias | (at1g45976 : 149.0) S-ribonuclease binding protein 1... | 0.03 | Orthogroups_2024-Update | |
| Seita.1G276600.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Seita.8G143300.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Sobic.004G161400.2 | No alias | Unknown function | 0.01 | Orthogroups_2024-Update | |
| Sobic.006G063100.3 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Sobic.006G063200.2 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Solyc02g031710 | No alias | SBP (S-ribonuclease binding protein) family protein... | 0.02 | Orthogroups_2024-Update | |
| Solyc04g011950 | No alias | LOW QUALITY:SBP (S-ribonuclease-binding protein) family... | 0.03 | Orthogroups_2024-Update | |
| Solyc04g078760 | No alias | CONSTANS interacting protein 4 | 0.03 | Orthogroups_2024-Update | |
| Solyc06g061020 | No alias | SBP (S-ribonuclease-binding protein) family protein... | 0.03 | Orthogroups_2024-Update | |
| Solyc10g055560 | No alias | SBP (S-ribonuclease binding protein) family protein... | 0.02 | Orthogroups_2024-Update | |
| Sopen01g053650 | No alias | hypothetical protein | 0.02 | Orthogroups_2024-Update | |
| Sopen02g009960 | No alias | Zinc finger, C3HC4 type (RING finger) | 0.02 | Orthogroups_2024-Update | |
| Sopen02g018310 | No alias | Zinc finger, C3HC4 type (RING finger) | 0.02 | Orthogroups_2024-Update | |
| Sopen03g031940 | No alias | Zinc finger, C3HC4 type (RING finger) | 0.03 | Orthogroups_2024-Update | |
| Sopen10g025300 | No alias | hypothetical protein | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003968 | RNA-directed 5'-3' RNA polymerase activity | IEP | Predicted GO |
| MF | GO:0005215 | transporter activity | IEP | Predicted GO |
| BP | GO:0006810 | transport | IEP | Predicted GO |
| BP | GO:0008150 | biological_process | IEP | Predicted GO |
| MF | GO:0009055 | electron transfer activity | IEP | Predicted GO |
| MF | GO:0016624 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor | IEP | Predicted GO |
| MF | GO:0016651 | oxidoreductase activity, acting on NAD(P)H | IEP | Predicted GO |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | Predicted GO |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | Predicted GO |
| MF | GO:0017150 | tRNA dihydrouridine synthase activity | IEP | Predicted GO |
| MF | GO:0022857 | transmembrane transporter activity | IEP | Predicted GO |
| MF | GO:0050664 | oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor | IEP | Predicted GO |
| BP | GO:0051179 | localization | IEP | Predicted GO |
| BP | GO:0051234 | establishment of localization | IEP | Predicted GO |
| BP | GO:0055085 | transmembrane transport | IEP | Predicted GO |
No InterPro domains available for this sequence
| No external refs found! |