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  5. PSME_00048891-RA

PSME_00048891-RA


Description : (q00257|1a12_cucma : 494.0) 1-aminocyclopropane-1-carboxylate synthase CMA101 (EC 4.4.1.14) (ACC synthase) (S-adenosyl-L-methionine methylthioadenosine-lyase) - Cucurbita maxima (Pumpkin) (Winter squash) & (at4g37770 : 489.0) Encodes an auxin inducible ACC synthase.; 1-amino-cyclopropane-1-carboxylate synthase 8 (ACS8); CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class I/classII (InterPro:IPR004839), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: 1-aminocyclopropane-1-carboxylate synthase 4 (TAIR:AT2G22810.1); Has 32273 Blast hits to 32271 proteins in 2940 species: Archae - 857; Bacteria - 22542; Metazoa - 664; Fungi - 765; Plants - 1331; Viruses - 0; Other Eukaryotes - 6114 (source: NCBI BLink). & (reliability: 978.0) & (original description: no original description)


Gene families : OG_42_0000419 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000419_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00048891-RA

Target Alias Description ECC score Gene Family Method Actions
Glyma.07G065700 No alias ACC synthase 1 0.03 Orthogroups_2024-Update
PSME_00017638-RA No alias (at4g26200 : 558.0) Member of a family of proteins in... 0.03 Orthogroups_2024-Update
PSME_00030827-RA No alias (at4g26200 : 568.0) Member of a family of proteins in... 0.03 Orthogroups_2024-Update
PSME_00030828-RA No alias (at4g26200 : 544.0) Member of a family of proteins in... 0.03 Orthogroups_2024-Update
PSME_00031323-RA No alias (at4g26200 : 559.0) Member of a family of proteins in... 0.01 Orthogroups_2024-Update
Sobic.010G020800.1 No alias EC_4.4 carbon-sulfur lyase 0.02 Orthogroups_2024-Update
Solyc02g063540 No alias 1-aminocyclopropane-1-carboxylate synthase 7 0.02 Orthogroups_2024-Update
Sopen02g014630 No alias Aminotransferase class I and II 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0009058 biosynthetic process IEA InterProScan predictions
MF GO:0030170 pyridoxal phosphate binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Predicted GO
MF GO:0004857 enzyme inhibitor activity IEP Predicted GO
MF GO:0005543 phospholipid binding IEP Predicted GO
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
BP GO:0019941 modification-dependent protein catabolic process IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
MF GO:0052689 carboxylic ester hydrolase activity IEP Predicted GO
BP GO:0071554 cell wall organization or biogenesis IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
InterPro domains Description Start Stop
IPR004839 Aminotransferase_I/II 11 375
No external refs found!