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  5. PSME_00048892-RA

PSME_00048892-RA


Description : (at5g46050 : 561.0) Encodes a di- and tri-peptide transporter involved in responses to wounding, virulent bacterial pathogens, and high NaCl concentrations. The protein is predicted to have 12 transmembrane helicies.; peptide transporter 3 (PTR3); FUNCTIONS IN: dipeptide transporter activity, tripeptide transporter activity, transporter activity; INVOLVED IN: in 12 processes; LOCATED IN: membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT5G46040.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1122.0) & (original description: no original description)


Gene families : OG_42_0000015 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000015_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00048892-RA
Cluster HCCA clusters: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
Glyma.09G237700 No alias nitrate transporter 1.5 0.06 Orthogroups_2024-Update
Glyma.10G296600 No alias Major facilitator superfamily protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G004720.1 No alias anion transporter *(NRT1/PTR) 0.03 Orthogroups_2024-Update
HORVU1Hr1G074550.7 No alias anion transporter *(NRT1/PTR) 0.03 Orthogroups_2024-Update
LOC_Os02g47090 No alias peptide transporter PTR2, putative, expressed 0.02 Orthogroups_2024-Update
MA_467252g0010 No alias (at3g53960 : 421.0) Major facilitator superfamily... 0.04 Orthogroups_2024-Update
MA_89317g0010 No alias (at2g40460 : 643.0) Major facilitator superfamily... 0.03 Orthogroups_2024-Update
PSME_00017178-RA No alias (at3g54140 : 785.0) Encodes a di- and tri-peptide... 0.04 Orthogroups_2024-Update
PSME_00017196-RA No alias (at5g01180 : 407.0) Encodes a dipeptide transporter... 0.04 Orthogroups_2024-Update
PSME_00039354-RA No alias (at5g46050 : 593.0) Encodes a di- and tri-peptide... 0.03 Orthogroups_2024-Update
Seita.9G226700.1 No alias anion transporter *(NRT1/PTR) 0.03 Orthogroups_2024-Update
Sobic.001G276400.1 No alias anion transporter *(NRT1/PTR) 0.02 Orthogroups_2024-Update
Sopen07g004440 No alias POT family 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA InterProScan predictions
MF GO:0022857 transmembrane transporter activity IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0003777 microtubule motor activity IEP Predicted GO
BP GO:0006298 mismatch repair IEP Predicted GO
BP GO:0006928 movement of cell or subcellular component IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
BP GO:0007018 microtubule-based movement IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
MF GO:0030983 mismatched DNA binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000109 POT_fam 107 535
No external refs found!