- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : (at1g07900 : 120.0) LOB domain-containing protein 1 (LBD1); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 11 (TAIR:AT2G28500.1); Has 1035 Blast hits to 1030 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1035; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 240.0) & (original description: no original description)
Gene families : OG_42_0013529 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0013529_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Pseudotsuga release: PSME_00048927-RA | |
| Cluster | HCCA clusters: Cluster_79 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | Predicted GO |
| BP | GO:0005975 | carbohydrate metabolic process | IEP | Predicted GO |
| BP | GO:0005984 | disaccharide metabolic process | IEP | Predicted GO |
| BP | GO:0005985 | sucrose metabolic process | IEP | Predicted GO |
| BP | GO:0006396 | RNA processing | IEP | Predicted GO |
| BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | Predicted GO |
| MF | GO:0008168 | methyltransferase activity | IEP | Predicted GO |
| MF | GO:0008173 | RNA methyltransferase activity | IEP | Predicted GO |
| BP | GO:0009056 | catabolic process | IEP | Predicted GO |
| BP | GO:0009057 | macromolecule catabolic process | IEP | Predicted GO |
| BP | GO:0009311 | oligosaccharide metabolic process | IEP | Predicted GO |
| MF | GO:0016157 | sucrose synthase activity | IEP | Predicted GO |
| MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Predicted GO |
| MF | GO:0016746 | transferase activity, transferring acyl groups | IEP | Predicted GO |
| MF | GO:0016747 | transferase activity, transferring acyl groups other than amino-acyl groups | IEP | Predicted GO |
| MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | Predicted GO |
| BP | GO:0019941 | modification-dependent protein catabolic process | IEP | Predicted GO |
| BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | Predicted GO |
| BP | GO:0044248 | cellular catabolic process | IEP | Predicted GO |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | Predicted GO |
| BP | GO:0051603 | proteolysis involved in cellular protein catabolic process | IEP | Predicted GO |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Predicted GO |
| BP | GO:1901575 | organic substance catabolic process | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004883 | LOB | 17 | 114 |
| No external refs found! |